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    PF_RS07710 slipin family protein [ Pyrococcus furiosus DSM 3638 ]

    Gene ID: 1469410, updated on 22-Oct-2024

    Summary

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    Gene symbol
    PF_RS07710
    Gene description
    slipin family protein
    Locus tag
    PF_RS07710
    Gene type
    protein coding
    Organism
    Pyrococcus furiosus DSM 3638 (strain: DSM 3638, type-material: type strain of Pyrococcus furiosus)
    Lineage
    Archaea; Methanobacteriati; Methanobacteriota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus
    Old locus tag
    PF1534
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    Genomic context

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    Sequence:
    NC_003413.1 (1432096..1432905)

    NC_003413.1Genomic Context describing neighboring genes Neighboring gene NAD(P)/FAD-dependent oxidoreductase Neighboring gene nodulation protein NfeD Neighboring gene maltodextrin phosphorylase Neighboring gene [protein ADP-ribosylglutamate] hydrolase Neighboring gene DUF835 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003413.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Slipins: ancient origin, duplication and diversification of the stomatin protein family. Green JB, et al. BMC Evol Biol, 2008 Feb 11. PMID 18267007, Free PMC Article
    2. The SPFH domain-containing proteins: more than lipid raft markers. Browman DT, et al. Trends Cell Biol, 2007 Aug. PMID 17766116
    3. Genomic sequence of hyperthermophile, Pyrococcus furiosus: implications for physiology and enzymology. Robb FT, et al. Methods Enzymol, 2001. PMID 11210495
    4. Evidence of recent lateral gene transfer among hyperthermophilic archaea. Diruggiero J, et al. Mol Microbiol, 2000 Nov. PMID 11115105
    5. The SPFH domain: implicated in regulating targeted protein turnover in stomatins and other membrane-associated proteins. Tavernarakis N, et al. Trends Biochem Sci, 1999 Nov. PMID 10542406

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    slipin family protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003413.1 Reference assembly

      Range
      1432096..1432905
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011012681.1 slipin family protein [Pyrococcus furiosus]

      See identical proteins and their annotated locations for WP_011012681.1

      UniProtKB/TrEMBL
      A0A5C0XSD6, I6UQU8, Q8U0Q1
      Conserved Domains (1) summary
      cd08826
      Location:55 → 232
      SPFH_eoslipins_u1; Uncharacterized prokaryotic subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
    Nucleotide Protein
    Heading Accession and Version

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