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    LOC606477 outward rectifying potassium channel 1 [ Zea mays ]

    Gene ID: 606477, updated on 27-Nov-2024

    Summary

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    Gene symbol
    LOC606477
    Gene description
    outward rectifying potassium channel 1
    Locus tag
    ZEAMMB73_Zm00001d037289
    See related
    EnsemblRapid:Zm00001eb280210
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    ZORK; ork1; GRMZM2G156255
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    Genomic context

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    See LOC606477 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 6 NC_050101.1 (126405014..126410734, complement)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 6 NC_024464.2 (119523365..119529002, complement)

    Chromosome 6 - NC_050101.1Genomic Context describing neighboring genes Neighboring gene protein transport protein SEC31 homolog B Neighboring gene gibberellin receptor GID1L2 Neighboring gene mitochondrion protein Neighboring gene uncharacterized LOC103629960 Neighboring gene U2 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Differential expression of K+ channels between guard cells and subsidiary cells within the maize stomatal complex. Büchsenschütz K, et al. Planta, 2005 Dec. PMID 16021501
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables voltage-gated potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in potassium ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    potassium channel KOR1
    Names
    Potassium channel SKOR
    potassium outward rectifying channel

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050101.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      126405014..126410734 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020539471.2 → XP_020395060.1  potassium channel KOR1 isoform X1

      UniProtKB/TrEMBL
      A0A804PWX4
      Related
      Zm00001eb280210_P004, Zm00001eb280210_T004
      Conserved Domains (2) summary
      sd00045
      Location:579 → 610
      ANK; ANK repeat [structural motif]
      cl26073
      Location:72 → 703
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_020539472.2 → XP_020395061.1  potassium channel KOR1 isoform X2

      Conserved Domains (2) summary
      sd00045
      Location:562 → 593
      ANK; ANK repeat [structural motif]
      cl26073
      Location:72 → 686
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_020539474.3 → XP_020395063.1  potassium channel KOR1 isoform X6

      UniProtKB/TrEMBL
      A0A804PW99, A0A804PYY6
      Related
      Zm00001eb280210_P005, Zm00001eb280210_T005
      Conserved Domains (2) summary
      sd00045
      Location:579 → 607
      ANK; ANK repeat [structural motif]
      cl26073
      Location:72 → 608
      Ank_2; Ankyrin repeats (3 copies)

    4. XM_020539473.3 → XP_020395062.1  potassium channel KOR1 isoform X4

      UniProtKB/TrEMBL
      A0A3L6EFB7
      Conserved Domains (3) summary
      sd00045
      Location:579 → 607
      ANK; ANK repeat [structural motif]
      pfam11834
      Location:754 → 830
      KHA; dimerisation domain of potassium ion channel
      cl26073
      Location:72 → 608
      Ank_2; Ankyrin repeats (3 copies)

    5. XM_008651059.3 → XP_008649281.2  potassium channel KOR1 isoform X3

      UniProtKB/TrEMBL
      A0A1D6LW78, A0A3L6EFB7
      Related
      Zm00001eb280210_P006, Zm00001eb280210_T006
      Conserved Domains (2) summary
      sd00045
      Location:579 → 610
      ANK; ANK repeat [structural motif]
      cl26073
      Location:72 → 831
      Ank_2; Ankyrin repeats (3 copies)

    6. XM_035960146.1 → XP_035816039.1  potassium channel KOR1 isoform X5

      UniProtKB/TrEMBL
      A0A3L6EFB7, A0A804UB28
      Related
      Zm00001eb280210_P003, Zm00001eb280210_T003
      Conserved Domains (2) summary
      PLN03192
      Location:72 → 814
      PLN03192; Voltage-dependent potassium channel; Provisional
      sd00045
      Location:562 → 593
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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