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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_042820.1 RefSeqGene
- Range
-
4972..191883
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001290020.2 → NP_001276949.1 outer dynein arm-docking complex subunit 2 isoform 1
See identical proteins and their annotated locations for NP_001276949.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1). Variants 1 and 3 encode the same protein.
- Source sequence(s)
-
AK292521, AK302627, DA184551
- Consensus CDS
-
CCDS7157.1
- UniProtKB/Swiss-Prot
- A8K906, B7Z7I1, Q5T2S8, Q9H0C0
- UniProtKB/TrEMBL
-
A0A140VKF7
- Related
- ENSP00000500782.1, ENST00000673439.1
- Conserved Domains (4) summary
-
- sd00044
Location:926 → 954
- HEAT; HEAT repeat [structural motif]
- sd00043
Location:883 → 908
- ARM; armadillo repeat [structural motif]
- cl26104
Location:827 → 1031
- HEAT_2; HEAT repeats
- cl27106
Location:625 → 862
- PLN03200; cellulose synthase-interactive protein; Provisional
-
NM_001290021.2 → NP_001276950.1 outer dynein arm-docking complex subunit 2 isoform 2
See identical proteins and their annotated locations for NP_001276950.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, lacks a portion of the 5' coding region, causing translation initiation at a downstream start codon, and contains an alternate exon in the 3' coding region, which results in a frameshift and a slightly shorter 3' UTR, compared to variant 1. The encoded isoform (2) has a shorter N-terminus and a distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AK292521, AK301708, AK302048, AK302627, AL355372
- Consensus CDS
-
CCDS91232.1
- UniProtKB/Swiss-Prot
-
Q5T2S8
- UniProtKB/TrEMBL
- B7Z7A1, B7Z7Y0
- Related
- ENSP00000500120.1, ENST00000672877.1
- Conserved Domains (4) summary
-
- cd00020
Location:359 → 473
- ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
- pfam13646
Location:410 → 512
- HEAT_2; HEAT repeats
- pfam13900
Location:547 → 572
- GVQW; Putative domain of unknown function
- sd00043
Location:235 → 266
- ARM; armadillo repeat [structural motif]
-
NM_001312689.2 → NP_001299618.1 outer dynein arm-docking complex subunit 2 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (3) has a shorter N-terminus than isoform 1.
- Source sequence(s)
-
AK302627, BC085611, BC140846
- Consensus CDS
-
CCDS91233.1
- UniProtKB/TrEMBL
- A0A5F9ZH22, B7Z7Y0
- Related
- ENSP00000499983.1, ENST00000672841.1
- Conserved Domains (4) summary
-
- cd00020
Location:526 → 640
- ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
- pfam13646
Location:577 → 679
- HEAT_2; HEAT repeats
- sd00044
Location:618 → 646
- HEAT; HEAT repeat [structural motif]
- sd00043
Location:575 → 600
- ARM; armadillo repeat [structural motif]
-
NM_018076.5 → NP_060546.2 outer dynein arm-docking complex subunit 2 isoform 1
See identical proteins and their annotated locations for NP_060546.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, compared to variant 1. Variants 1 and 3 encode the same protein (isoform 1).
- Source sequence(s)
-
AK302627, AL390866, BC085611, BC140846
- Consensus CDS
-
CCDS7157.1
- UniProtKB/Swiss-Prot
- A8K906, B7Z7I1, Q5T2S8, Q9H0C0
- UniProtKB/TrEMBL
-
A0A140VKF7
- Related
- ENSP00000306410.5, ENST00000305242.10
- Conserved Domains (4) summary
-
- sd00044
Location:926 → 954
- HEAT; HEAT repeat [structural motif]
- sd00043
Location:883 → 908
- ARM; armadillo repeat [structural motif]
- cl26104
Location:827 → 1031
- HEAT_2; HEAT repeats
- cl27106
Location:625 → 862
- PLN03200; cellulose synthase-interactive protein; Provisional
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000010.11 Reference GRCh38.p14 Primary Assembly
- Range
-
27812168..27999675 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047425404.1 → XP_047281360.1 outer dynein arm-docking complex subunit 2 isoform X4
- UniProtKB/Swiss-Prot
- A8K906, B7Z7I1, Q5T2S8, Q9H0C0
- UniProtKB/TrEMBL
-
A0A140VKF7
-
XM_024448052.2 → XP_024303820.1 outer dynein arm-docking complex subunit 2 isoform X1
- Conserved Domains (3) summary
-
- sd00043
Location:710 → 741
- ARM; armadillo repeat [structural motif]
- pfam13646
Location:885 → 990
- HEAT_2; HEAT repeats
- cl27106
Location:449 → 684
- PLN03200; cellulose synthase-interactive protein; Provisional
-
XM_047425414.1 → XP_047281370.1 outer dynein arm-docking complex subunit 2 isoform X9
-
XM_047425413.1 → XP_047281369.1 outer dynein arm-docking complex subunit 2 isoform X8
- UniProtKB/TrEMBL
-
B7Z7Y0
-
XM_047425410.1 → XP_047281366.1 outer dynein arm-docking complex subunit 2 isoform X7
-
XM_047425408.1 → XP_047281364.1 outer dynein arm-docking complex subunit 2 isoform X6
-
XM_047425405.1 → XP_047281361.1 outer dynein arm-docking complex subunit 2 isoform X5
-
XM_047425401.1 → XP_047281357.1 outer dynein arm-docking complex subunit 2 isoform X3
-
XM_024448051.2 → XP_024303819.1 outer dynein arm-docking complex subunit 2 isoform X1
- Conserved Domains (3) summary
-
- sd00043
Location:710 → 741
- ARM; armadillo repeat [structural motif]
- pfam13646
Location:885 → 990
- HEAT_2; HEAT repeats
- cl27106
Location:449 → 684
- PLN03200; cellulose synthase-interactive protein; Provisional
-
XM_047425411.1 → XP_047281367.1 outer dynein arm-docking complex subunit 2 isoform X8
- UniProtKB/TrEMBL
-
B7Z7Y0
-
XM_047425409.1 → XP_047281365.1 outer dynein arm-docking complex subunit 2 isoform X7
-
XM_047425407.1 → XP_047281363.1 outer dynein arm-docking complex subunit 2 isoform X6
-
XM_011519527.2 → XP_011517829.1 outer dynein arm-docking complex subunit 2 isoform X3
See identical proteins and their annotated locations for XP_011517829.1
- Conserved Domains (3) summary
-
- cd00020
Location:834 → 948
- ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
- pfam13646
Location:885 → 987
- HEAT_2; HEAT repeats
- sd00043
Location:710 → 741
- ARM; armadillo repeat [structural motif]
-
XM_024448053.2 → XP_024303821.1 outer dynein arm-docking complex subunit 2 isoform X2
- Conserved Domains (4) summary
-
- sd00044
Location:969 → 997
- HEAT; HEAT repeat [structural motif]
- sd00043
Location:926 → 951
- ARM; armadillo repeat [structural motif]
- cl25709
Location:657 → 1085
- Arm_3; Atypical Arm repeat
- cl27106
Location:449 → 684
- PLN03200; cellulose synthase-interactive protein; Provisional
-
XM_024448049.2 → XP_024303817.1 outer dynein arm-docking complex subunit 2 isoform X1
- Conserved Domains (3) summary
-
- sd00043
Location:710 → 741
- ARM; armadillo repeat [structural motif]
- pfam13646
Location:885 → 990
- HEAT_2; HEAT repeats
- cl27106
Location:449 → 684
- PLN03200; cellulose synthase-interactive protein; Provisional
-
XM_047425402.1 → XP_047281358.1 outer dynein arm-docking complex subunit 2 isoform X4
- UniProtKB/Swiss-Prot
- A8K906, B7Z7I1, Q5T2S8, Q9H0C0
- UniProtKB/TrEMBL
-
A0A140VKF7
-
XM_024448050.2 → XP_024303818.1 outer dynein arm-docking complex subunit 2 isoform X1
- Conserved Domains (3) summary
-
- sd00043
Location:710 → 741
- ARM; armadillo repeat [structural motif]
- pfam13646
Location:885 → 990
- HEAT_2; HEAT repeats
- cl27106
Location:449 → 684
- PLN03200; cellulose synthase-interactive protein; Provisional
-
XM_047425403.1 → XP_047281359.1 outer dynein arm-docking complex subunit 2 isoform X4
- UniProtKB/Swiss-Prot
- A8K906, B7Z7I1, Q5T2S8, Q9H0C0
- UniProtKB/TrEMBL
-
A0A140VKF7
-
XM_047425412.1 → XP_047281368.1 outer dynein arm-docking complex subunit 2 isoform X8
- UniProtKB/TrEMBL
-
B7Z7Y0
-
XM_024448057.2 → XP_024303825.1 outer dynein arm-docking complex subunit 2 isoform X11
- UniProtKB/TrEMBL
-
A0A5F9ZI13
- Conserved Domains (3) summary
-
- sd00043
Location:348 → 379
- ARM; armadillo repeat [structural motif]
- cl26104
Location:506 → 674
- HEAT_2; HEAT repeats
- cl27106
Location:87 → 322
- PLN03200; cellulose synthase-interactive protein; Provisional
-
XM_024448055.2 → XP_024303823.1 outer dynein arm-docking complex subunit 2 isoform X10
- UniProtKB/TrEMBL
-
A0A5F9ZI13
- Conserved Domains (3) summary
-
- sd00043
Location:402 → 433
- ARM; armadillo repeat [structural motif]
- pfam13646
Location:577 → 682
- HEAT_2; HEAT repeats
- cl27106
Location:141 → 376
- PLN03200; cellulose synthase-interactive protein; Provisional
-
XM_024448056.2 → XP_024303824.1 outer dynein arm-docking complex subunit 2 isoform X10
- UniProtKB/TrEMBL
-
A0A5F9ZI13
- Conserved Domains (3) summary
-
- sd00043
Location:402 → 433
- ARM; armadillo repeat [structural motif]
- pfam13646
Location:577 → 682
- HEAT_2; HEAT repeats
- cl27106
Location:141 → 376
- PLN03200; cellulose synthase-interactive protein; Provisional
-
XM_024448058.2 → XP_024303826.1 outer dynein arm-docking complex subunit 2 isoform X13
- Conserved Domains (5) summary
-
- smart00185
Location:49 → 89
- ARM; Armadillo/beta-catenin-like repeats
- pfam00514
Location:149 → 186
- Arm; Armadillo/beta-catenin-like repeat
- sd00043
Location:235 → 266
- ARM; armadillo repeat [structural motif]
- cl26104
Location:393 → 561
- HEAT_2; HEAT repeats
- cl27106
Location:150 → 348
- PLN03200; cellulose synthase-interactive protein; Provisional
-
XM_017016371.2 → XP_016871860.1 outer dynein arm-docking complex subunit 2 isoform X12
- Conserved Domains (2) summary
-
- cd00020
Location:488 → 593
- ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
- sd00043
Location:571 → 617
- ARM; armadillo repeat [structural motif]
Alternate T2T-CHM13v2.0
Genomic
-
NC_060934.1 Alternate T2T-CHM13v2.0
- Range
-
27843337..28030843 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054366177.1 → XP_054222152.1 outer dynein arm-docking complex subunit 2 isoform X4
-
XM_054366171.1 → XP_054222146.1 outer dynein arm-docking complex subunit 2 isoform X1
-
XM_054366186.1 → XP_054222161.1 outer dynein arm-docking complex subunit 2 isoform X9
-
XM_054366185.1 → XP_054222160.1 outer dynein arm-docking complex subunit 2 isoform X8
- UniProtKB/TrEMBL
-
B7Z7Y0
-
XM_054366182.1 → XP_054222157.1 outer dynein arm-docking complex subunit 2 isoform X7
-
XM_054366180.1 → XP_054222155.1 outer dynein arm-docking complex subunit 2 isoform X6
-
XM_054366178.1 → XP_054222153.1 outer dynein arm-docking complex subunit 2 isoform X5
-
XM_054366174.1 → XP_054222149.1 outer dynein arm-docking complex subunit 2 isoform X3
-
XM_054366168.1 → XP_054222143.1 outer dynein arm-docking complex subunit 2 isoform X1
-
XM_054366183.1 → XP_054222158.1 outer dynein arm-docking complex subunit 2 isoform X8
- UniProtKB/TrEMBL
-
B7Z7Y0
-
XM_054366181.1 → XP_054222156.1 outer dynein arm-docking complex subunit 2 isoform X7
-
XM_054366179.1 → XP_054222154.1 outer dynein arm-docking complex subunit 2 isoform X6
-
XM_054366173.1 → XP_054222148.1 outer dynein arm-docking complex subunit 2 isoform X3
-
XM_054366172.1 → XP_054222147.1 outer dynein arm-docking complex subunit 2 isoform X2
-
XM_054366169.1 → XP_054222144.1 outer dynein arm-docking complex subunit 2 isoform X1
-
XM_054366175.1 → XP_054222150.1 outer dynein arm-docking complex subunit 2 isoform X4
-
XM_054366170.1 → XP_054222145.1 outer dynein arm-docking complex subunit 2 isoform X1
-
XM_054366176.1 → XP_054222151.1 outer dynein arm-docking complex subunit 2 isoform X4
-
XM_054366184.1 → XP_054222159.1 outer dynein arm-docking complex subunit 2 isoform X8
- UniProtKB/TrEMBL
-
B7Z7Y0
-
XM_054366189.1 → XP_054222164.1 outer dynein arm-docking complex subunit 2 isoform X11
- UniProtKB/TrEMBL
-
A0A5F9ZI13
-
XM_054366187.1 → XP_054222162.1 outer dynein arm-docking complex subunit 2 isoform X10
- UniProtKB/TrEMBL
-
A0A5F9ZI13
-
XM_054366188.1 → XP_054222163.1 outer dynein arm-docking complex subunit 2 isoform X10
- UniProtKB/TrEMBL
-
A0A5F9ZI13
-
XM_054366191.1 → XP_054222166.1 outer dynein arm-docking complex subunit 2 isoform X13
-
XM_054366190.1 → XP_054222165.1 outer dynein arm-docking complex subunit 2 isoform X12
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_032150.1: Suppressed sequence
- Description
- NM_032150.1: This RefSeq record was removed by NCBI staff. Contact [email protected] for further information.