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    CG34345 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 5740402, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG34345provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0085374
    Locus tag
    Dmel_CG34345
    See related
    AllianceGenome:FB:FBgn0085374
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BP1012; CG11053; CG34009; Dmel\CG34345
    Old locus tag
    CG11053; CG34009; Dmel_CG11053; Dmel_CG34009
    Summary
    Predicted to enable procollagen-proline 4-dioxygenase activity. Predicted to be active in endoplasmic reticulum. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG34345 in Genome Data Viewer
    Location:
    26F3-26F3; 2-21 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (6623112..6625359)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (6623112..6625359)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44913 Neighboring gene Dpr-interacting protein iota Neighboring gene Organic anion transporting polypeptide 26F Neighboring gene uncharacterized protein Neighboring gene Transport and Golgi organization 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-wide analysis of Notch signalling in Drosophila by transgenic RNAi. Mummery-Widmer JL, et al. Nature, 2009 Apr 23. PMID 19363474, Free PMC Article
    2. A computational and experimental approach to validating annotations and gene predictions in the Drosophila melanogaster genome. Yandell M, et al. Proc Natl Acad Sci U S A, 2005 Feb 1. PMID 15668397, Free PMC Article
    3. Genome-wide RNAi screen identifies networks involved in intestinal stem cell regulation in Drosophila. Zeng X, et al. Cell Rep, 2015 Feb 24. PMID 25704823, Free PMC Article
    4. Genome features of "Dark-fly", a Drosophila line reared long-term in a dark environment. Izutsu M, et al. PLoS One, 2012. PMID 22432011, Free PMC Article
    5. Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome. MacMillan HA, et al. Sci Rep, 2016 Jun 30. PMID 27357258, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables L-ascorbic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables procollagen-proline 4-dioxygenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables procollagen-proline 4-dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG34345-PA
    NP_001097101.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      6623112..6625359
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001103631.3 → NP_001097101.1  uncharacterized protein Dmel_CG34345 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097101.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8DYR4, Q1RKV3
      Conserved Domains (2) summary
      smart00702
      Location:324 → 489
      P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
      pfam08336
      Location:40 → 170
      P4Ha_N; Prolyl 4-Hydroxylase alpha-subunit, N-terminal region
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A8DYR4 A8DYR4

    Gene LinkOut

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