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    Regnase-1 Regnase 1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42394, updated on 9-Dec-2024

    Summary

    Official Symbol
    Regnase-1provided by FlyBase
    Official Full Name
    Regnase 1provided by FlyBase
    Primary source
    FLYBASE:FBgn0038769
    Locus tag
    Dmel_CG10889
    See related
    AllianceGenome:FB:FBgn0038769
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG10889; Dmel\CG10889
    Summary
    Predicted to enable RNA endonuclease activity and mRNA binding activity. Involved in mRNA catabolic process and miRNA catabolic process. Predicted to be active in cytoplasmic ribonucleoprotein granule and nucleus. Is expressed in organism. Human ortholog(s) of this gene implicated in hepatitis B. Orthologous to several human genes including ZC3H12A (zinc finger CCCH-type containing 12A); ZC3H12B (zinc finger CCCH-type containing 12B); and ZC3H12C (zinc finger CCCH-type containing 12C). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Regnase-1 in Genome Data Viewer
    Location:
    92C1-92C2; 3-67 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (20033881..20036056, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (15859603..15861778, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene trade embargo Neighboring gene identity crisis Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene I'm not dead yet 2 Neighboring gene uncharacterized protein Neighboring gene midlife crisis

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA endonuclease activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA nuclease activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables mRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in mRNA catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in miRNA catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasmic ribonucleoprotein granule IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    regnase 1
    Names
    CG10889-PA
    Regnase-1-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      20033881..20036056 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142606.4NP_650863.3  regnase 1 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650863.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8T0D9, Q9VDQ2
      Related
      FBpp0083248
      Conserved Domains (1) summary
      pfam11977
      Location:131284
      RNase_Zc3h12a; Zc3h12a-like Ribonuclease NYN domain