U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Uxs UDP-xylose synthase [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38911, updated on 9-Dec-2024

    Summary

    Official Symbol
    Uxsprovided by FlyBase
    Official Full Name
    UDP-xylose synthaseprovided by FlyBase
    Primary source
    FLYBASE:FBgn0035848
    Locus tag
    Dmel_CG7979
    See related
    AllianceGenome:FB:FBgn0035848
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG7979; Dmel\CG7979
    Summary
    Predicted to enable NAD+ binding activity and UDP-glucuronate decarboxylase activity. Predicted to be involved in UDP-D-xylose biosynthetic process. Predicted to be located in Golgi membrane. Predicted to be active in cytoplasm. Is expressed in adult head and organism. Orthologous to human UXS1 (UDP-glucuronate decarboxylase 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Uxs in Genome Data Viewer
    Location:
    66B11-66B11; 3-22 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (8180923..8183369)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (8174023..8176469)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene N-myristoyl transferase Neighboring gene methuselah-like 7 Neighboring gene antisense RNA:CR45869 Neighboring gene antisense RNA:CR45870 Neighboring gene estrogen-related receptor

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables NAD+ binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables NAD+ binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables UDP-glucuronate decarboxylase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables UDP-glucuronate decarboxylase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in D-xylose metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in UDP-D-xylose biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of glycosaminoglycan biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in Golgi membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    UDP-xylose synthase
    Names
    CG7979-PA
    Uxs-PA
    NP_648182.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      8180923..8183369
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_139925.3NP_648182.1  UDP-xylose synthase [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648182.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VSE8
      Related
      FBpp0076413
      Conserved Domains (2) summary
      cd05230
      Location:116419
      UGD_SDR_e; UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs
      COG0451
      Location:116424
      WcaG; Nucleoside-diphosphate-sugar epimerase [Cell wall/membrane/envelope biogenesis]