U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG6293 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41259, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG6293provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037807
    Locus tag
    Dmel_CG6293
    See related
    AllianceGenome:FB:FBgn0037807
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG6293
    Summary
    Predicted to enable L-ascorbate:sodium symporter activity. Predicted to be involved in L-ascorbic acid transmembrane transport. Predicted to be located in plasma membrane. Is expressed in adult brain cell body rind; adult head; and organism. Orthologous to human SLC23A1 (solute carrier family 23 member 1) and SLC23A2 (solute carrier family 23 member 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG6293 in Genome Data Viewer
    Location:
    86A7-86A7; 3-49 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (10307806..10311613, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (6133528..6137335, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene pontin Neighboring gene Nuak family kinase Neighboring gene transfer RNA:Serine-GCT 2-1 Neighboring gene BIR repeat containing ubiquitin-conjugating enzyme Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Drosophila Bruce can potently suppress Rpr- and Grim-dependent but not Hid-dependent cell death. Vernooy SY, et al. Curr Biol, 2002 Jul 9. PMID 12121627
    2. Genome-wide microarray analysis of TGFbeta signaling in the Drosophila brain. Yang M, et al. BMC Dev Biol, 2004 Oct 8. PMID 15473904, Free PMC Article
    3. Effect of heritable symbionts on maternally-derived embryo transcripts. Mateos M, et al. Sci Rep, 2019 Jun 20. PMID 31222094, Free PMC Article
    4. Deciphering the DNA code for the function of the Drosophila polydactyl zinc finger protein Suppressor of Hairy-wing. Baxley RM, et al. Nucleic Acids Res, 2017 May 5. PMID 28158673, Free PMC Article
    5. The insulator protein Suppressor of Hairy-wing is an essential transcriptional repressor in the Drosophila ovary. Soshnev AA, et al. Development, 2013 Sep. PMID 23884443, Free PMC Article

    See all (41) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables L-ascorbate:sodium symporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in L-ascorbic acid transmembrane transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG6293-PA
    CG6293-PB

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      10307806..10311613 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001275530.1 → NP_001262459.1  uncharacterized protein Dmel_CG6293, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262459.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VH02
      Conserved Domains (2) summary
      pfam00860
      Location:48 → 464
      Xan_ur_permease; Permease family
      cl23746
      Location:32 → 519
      HCO3_cotransp; HCO3- transporter family

    2. NM_141737.3 → NP_649994.1  uncharacterized protein Dmel_CG6293, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649994.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VH02
      Related
      FBpp0081718
      Conserved Domains (2) summary
      pfam00860
      Location:48 → 464
      Xan_ur_permease; Permease family
      cl23746
      Location:32 → 519
      HCO3_cotransp; HCO3- transporter family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VH02 Q9VH02

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools
    Miscellaneous