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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001195822.2 → NP_001182751.1 hydroxysteroid dehydrogenase-like protein 2 isoform 2
See identical proteins and their annotated locations for NP_001182751.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks two consecutive exons in the coding region, compared to variant 1. The resulting protein (isoform 2) is shorter than isoform 1.
- Source sequence(s)
-
AL162732, BC004331
- Consensus CDS
-
CCDS56582.1
- UniProtKB/TrEMBL
-
B2R923
- Related
- ENSP00000381783.1, ENST00000398803.1
- Conserved Domains (2) summary
-
- pfam02036
Location:246 → 339
- SCP2; SCP-2 sterol transfer family
- cl21454
Location:8 → 175
- NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
-
NM_032303.5 → NP_115679.2 hydroxysteroid dehydrogenase-like protein 2 isoform 1
See identical proteins and their annotated locations for NP_115679.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AK098721, AY093428, BC004331, BC095451
- Consensus CDS
-
CCDS43864.1
- UniProtKB/Swiss-Prot
- A8K1L4, A8K8X1, A8MSV3, Q658M8, Q6YN16, Q9BT58
- UniProtKB/TrEMBL
-
B2R923
- Related
- ENSP00000381785.3, ENST00000398805.8
- Conserved Domains (2) summary
-
- cd09762
Location:8 → 248
- HSDL2_SDR_c; human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs
- pfam02036
Location:319 → 412
- SCP2; SCP-2 sterol transfer family
RNA
-
NR_036651.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an alternate internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK303645, AL162732, BC004331
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000009.12 Reference GRCh38.p14 Primary Assembly
- Range
-
112380108..112472405
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017015203.3 → XP_016870692.1 hydroxysteroid dehydrogenase-like protein 2 isoform X2
- UniProtKB/TrEMBL
-
B4DWC7
- Conserved Domains (2) summary
-
- pfam02036
Location:144 → 238
- SCP2; SCP-2 sterol transfer family
- cl21454
Location:1 → 100
- NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
-
XM_011519091.4 → XP_011517393.1 hydroxysteroid dehydrogenase-like protein 2 isoform X1
- Conserved Domains (2) summary
-
- cd09762
Location:8 → 248
- HSDL2_SDR_c; human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs
- pfam00106
Location:12 → 197
- adh_short; short chain dehydrogenase
-
XM_047423969.1 → XP_047279925.1 hydroxysteroid dehydrogenase-like protein 2 isoform X2
- UniProtKB/TrEMBL
-
B4DWC7
Alternate T2T-CHM13v2.0
Genomic
-
NC_060933.1 Alternate T2T-CHM13v2.0
- Range
-
124551300..124643585
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054363980.1 → XP_054219955.1 hydroxysteroid dehydrogenase-like protein 2 isoform X2
- UniProtKB/TrEMBL
-
B4DWC7
-
XM_054363979.1 → XP_054219954.1 hydroxysteroid dehydrogenase-like protein 2 isoform X1
-
XM_054363981.1 → XP_054219956.1 hydroxysteroid dehydrogenase-like protein 2 isoform X2
- UniProtKB/TrEMBL
-
B4DWC7