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    sarcolemmal membrane-associated protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843037, updated on 18-Sep-2024

    Summary

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    Official Full Name
    sarcolemmal membrane-associated protein
    Primary source
    TAIR:AT1G67170
    Locus tag
    AT1G67170
    See related
    Araport:AT1G67170
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F5A8.8; F5A8_8
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (25127173..25129464)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene transmembrane protein, putative (DUF247) Neighboring gene F-box/kelch-repeat protein, putative (DUF295) Neighboring gene zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein Neighboring gene F-box/RNI-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis FLL2 promotes liquid-liquid phase separation of polyadenylation complexes. Fang X, et al. Nature, 2019 May. PMID 31043738, Free PMC Article
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001334276.1
    NM_105387.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nuclear body IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sarcolemmal membrane-associated protein
    NP_176888.2
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14750.1); Has 5478 Blast hits to 4354 proteins in 533 species: Archae - 87; Bacteria - 653; Metazoa - 2554; Fungi - 380; Plants - 418; Viruses - 16; Other Eukaryotes - 1370 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      25127173..25129464
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105387.5 → NP_176888.2  sarcolemmal membrane-associated protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176888.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84TD8, Q9ZW90
      UniProtKB/TrEMBL
      A0A178WGE5, A0A654ELR0
      Conserved Domains (2) summary
      PTZ00395
      Location:244 → 357
      PTZ00395; Sec24-related protein; Provisional
      TIGR02168
      Location:57 → 233
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    2. NM_001334276.1 → NP_001320766.1  sarcolemmal membrane-associated protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84TD8, Q9ZW90
      UniProtKB/TrEMBL
      A0A178WGE5, A0A654ELR0
      Conserved Domains (2) summary
      PTZ00395
      Location:244 → 357
      PTZ00395; Sec24-related protein; Provisional
      TIGR02168
      Location:57 → 233
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q84TD8.1

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