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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001102594.3 → NP_001096064.1 probable E3 ubiquitin-protein ligase DTX2 isoform a
See identical proteins and their annotated locations for NP_001096064.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1, and encodes isoform A. Variants 1-3 encode the same isoform (A).
- Source sequence(s)
-
AB040961, AY225124, BC008856, BC018555, DA003606
- Consensus CDS
-
CCDS5587.1
- UniProtKB/Swiss-Prot
- Q4ZH49, Q6XM87, Q6XM88, Q86UW9, Q96H69, Q9H890, Q9P200
- UniProtKB/TrEMBL
-
E7ET89
- Related
- ENSP00000411986.2, ENST00000430490.7
- Conserved Domains (4) summary
-
- smart00678
Location:21 → 105
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd09633
Location:481 → 613
- Deltex_C; Domain found at the C-terminus of deltex-like
- cd16672
Location:411 → 482
- RING-H2_DTX2; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase Deltex2 (DTX2) and similar proteins
- cl26464
Location:166 → 394
- Atrophin-1; Atrophin-1 family
-
NM_001102595.3 → NP_001096065.1 probable E3 ubiquitin-protein ligase DTX2 isoform a
See identical proteins and their annotated locations for NP_001096065.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, compared to variant 1, and encodes isoform A. Variants 1-3 encode the same isoform (A).
- Source sequence(s)
-
AY225124, BC008856, BC018555, DA003606
- Consensus CDS
-
CCDS5587.1
- UniProtKB/Swiss-Prot
- Q4ZH49, Q6XM87, Q6XM88, Q86UW9, Q96H69, Q9H890, Q9P200
- UniProtKB/TrEMBL
-
E7ET89
- Related
- ENSP00000390218.2, ENST00000413936.6
- Conserved Domains (4) summary
-
- smart00678
Location:21 → 105
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd09633
Location:481 → 613
- Deltex_C; Domain found at the C-terminus of deltex-like
- cd16672
Location:411 → 482
- RING-H2_DTX2; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase Deltex2 (DTX2) and similar proteins
- cl26464
Location:166 → 394
- Atrophin-1; Atrophin-1 family
-
NM_001102596.2 → NP_001096066.1 probable E3 ubiquitin-protein ligase DTX2 isoform b
See identical proteins and their annotated locations for NP_001096066.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks an in-frame exon, compared to variant 1, and encodes a shorter isoform (B), compared to isoform A.
- Source sequence(s)
-
AY225125, BC008856, BP306192
- Consensus CDS
-
CCDS43605.1
- UniProtKB/TrEMBL
-
E7ET89
- Related
- ENSP00000392545.2, ENST00000446820.6
- Conserved Domains (3) summary
-
- smart00678
Location:21 → 105
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd09633
Location:434 → 566
- Deltex_C; Domain found at the C-terminus of deltex-like
- cd16672
Location:364 → 435
- RING-H2_DTX2; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase Deltex2 (DTX2) and similar proteins
-
NM_020892.4 → NP_065943.2 probable E3 ubiquitin-protein ligase DTX2 isoform a
See identical proteins and their annotated locations for NP_065943.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (A). Variants 1-3 encode the same isoform (A).
- Source sequence(s)
-
AY225124, BC008856, BC018555, DA917716
- Consensus CDS
-
CCDS5587.1
- UniProtKB/Swiss-Prot
- Q4ZH49, Q6XM87, Q6XM88, Q86UW9, Q96H69, Q9H890, Q9P200
- UniProtKB/TrEMBL
-
E7ET89
- Related
- ENSP00000322885.5, ENST00000324432.9
- Conserved Domains (4) summary
-
- smart00678
Location:21 → 105
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd09633
Location:481 → 613
- Deltex_C; Domain found at the C-terminus of deltex-like
- cd16672
Location:411 → 482
- RING-H2_DTX2; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase Deltex2 (DTX2) and similar proteins
- cl26464
Location:166 → 394
- Atrophin-1; Atrophin-1 family
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000007.14 Reference GRCh38.p14 Primary Assembly
- Range
-
76461709..76505991
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047419856.1 → XP_047275812.1 probable E3 ubiquitin-protein ligase DTX2 isoform X1
- UniProtKB/Swiss-Prot
- Q4ZH49, Q6XM87, Q6XM88, Q86UW9, Q96H69, Q9H890, Q9P200
- UniProtKB/TrEMBL
-
E7ET89
-
XM_047419854.1 → XP_047275810.1 probable E3 ubiquitin-protein ligase DTX2 isoform X1
- UniProtKB/Swiss-Prot
- Q4ZH49, Q6XM87, Q6XM88, Q86UW9, Q96H69, Q9H890, Q9P200
- UniProtKB/TrEMBL
-
E7ET89
-
XM_047419855.1 → XP_047275811.1 probable E3 ubiquitin-protein ligase DTX2 isoform X1
- UniProtKB/Swiss-Prot
- Q4ZH49, Q6XM87, Q6XM88, Q86UW9, Q96H69, Q9H890, Q9P200
- UniProtKB/TrEMBL
-
E7ET89
-
XM_047419853.1 → XP_047275809.1 probable E3 ubiquitin-protein ligase DTX2 isoform X1
- UniProtKB/Swiss-Prot
- Q4ZH49, Q6XM87, Q6XM88, Q86UW9, Q96H69, Q9H890, Q9P200
- UniProtKB/TrEMBL
-
E7ET89
-
XM_047419860.1 → XP_047275816.1 probable E3 ubiquitin-protein ligase DTX2 isoform X3
- UniProtKB/TrEMBL
-
E7ET89
-
XM_047419858.1 → XP_047275814.1 probable E3 ubiquitin-protein ligase DTX2 isoform X2
- UniProtKB/TrEMBL
-
E7ET89
-
XM_047419862.1 → XP_047275818.1 probable E3 ubiquitin-protein ligase DTX2 isoform X4
- UniProtKB/TrEMBL
-
E7ET89
-
XM_017011726.3 → XP_016867215.1 probable E3 ubiquitin-protein ligase DTX2 isoform X2
- UniProtKB/TrEMBL
-
E7ET89
- Conserved Domains (3) summary
-
- smart00678
Location:21 → 105
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd09633
Location:434 → 566
- Deltex_C; Domain found at the C-terminus of deltex-like
- cd16672
Location:364 → 435
- RING-H2_DTX2; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase Deltex2 (DTX2) and similar proteins
-
XM_047419857.1 → XP_047275813.1 probable E3 ubiquitin-protein ligase DTX2 isoform X1
- UniProtKB/Swiss-Prot
- Q4ZH49, Q6XM87, Q6XM88, Q86UW9, Q96H69, Q9H890, Q9P200
- UniProtKB/TrEMBL
-
E7ET89
-
XM_047419861.1 → XP_047275817.1 probable E3 ubiquitin-protein ligase DTX2 isoform X1
- UniProtKB/Swiss-Prot
- Q4ZH49, Q6XM87, Q6XM88, Q86UW9, Q96H69, Q9H890, Q9P200
- UniProtKB/TrEMBL
-
E7ET89
-
XM_011515774.2 → XP_011514076.1 probable E3 ubiquitin-protein ligase DTX2 isoform X1
See identical proteins and their annotated locations for XP_011514076.1
- UniProtKB/Swiss-Prot
- Q4ZH49, Q6XM87, Q6XM88, Q86UW9, Q96H69, Q9H890, Q9P200
- UniProtKB/TrEMBL
-
E7ET89
- Conserved Domains (4) summary
-
- smart00678
Location:21 → 105
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd09633
Location:481 → 613
- Deltex_C; Domain found at the C-terminus of deltex-like
- cd16672
Location:411 → 482
- RING-H2_DTX2; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase Deltex2 (DTX2) and similar proteins
- cl26464
Location:166 → 394
- Atrophin-1; Atrophin-1 family
-
XM_047419852.1 → XP_047275808.1 probable E3 ubiquitin-protein ligase DTX2 isoform X1
- UniProtKB/Swiss-Prot
- Q4ZH49, Q6XM87, Q6XM88, Q86UW9, Q96H69, Q9H890, Q9P200
- UniProtKB/TrEMBL
-
E7ET89
-
XM_047419859.1 → XP_047275815.1 probable E3 ubiquitin-protein ligase DTX2 isoform X2
- UniProtKB/TrEMBL
-
E7ET89
-
XM_024446649.2 → XP_024302417.1 probable E3 ubiquitin-protein ligase DTX2 isoform X1
- UniProtKB/Swiss-Prot
- Q4ZH49, Q6XM87, Q6XM88, Q86UW9, Q96H69, Q9H890, Q9P200
- UniProtKB/TrEMBL
-
E7ET89
- Conserved Domains (4) summary
-
- smart00678
Location:21 → 105
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd09633
Location:481 → 613
- Deltex_C; Domain found at the C-terminus of deltex-like
- cd16672
Location:411 → 482
- RING-H2_DTX2; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase Deltex2 (DTX2) and similar proteins
- cl26464
Location:166 → 394
- Atrophin-1; Atrophin-1 family
-
XM_017011730.3 → XP_016867219.1 probable E3 ubiquitin-protein ligase DTX2 isoform X5
-
XM_017011724.2 → XP_016867213.1 probable E3 ubiquitin-protein ligase DTX2 isoform X1
- UniProtKB/Swiss-Prot
- Q4ZH49, Q6XM87, Q6XM88, Q86UW9, Q96H69, Q9H890, Q9P200
- UniProtKB/TrEMBL
-
E7ET89
- Conserved Domains (4) summary
-
- smart00678
Location:21 → 105
- WWE; Domain in Deltex and TRIP12 homologues. Possibly involved in regulation of ubiquitin-mediated proteolysis
- cd09633
Location:481 → 613
- Deltex_C; Domain found at the C-terminus of deltex-like
- cd16672
Location:411 → 482
- RING-H2_DTX2; RING finger, H2 subclass, found in E3 ubiquitin-protein ligase Deltex2 (DTX2) and similar proteins
- cl26464
Location:166 → 394
- Atrophin-1; Atrophin-1 family
Reference GRCh38.p14 ALT_REF_LOCI_1
Genomic
-
NT_187561.1 Reference GRCh38.p14 ALT_REF_LOCI_1
- Range
-
1310..5010
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060931.1 Alternate T2T-CHM13v2.0
- Range
-
77750196..77797419
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054357187.1 → XP_054213162.1 probable E3 ubiquitin-protein ligase DTX2 isoform X1
- UniProtKB/TrEMBL
-
E7ET89
-
XM_054357185.1 → XP_054213160.1 probable E3 ubiquitin-protein ligase DTX2 isoform X1
- UniProtKB/TrEMBL
-
E7ET89
-
XM_054357188.1 → XP_054213163.1 probable E3 ubiquitin-protein ligase DTX2 isoform X1
- UniProtKB/TrEMBL
-
E7ET89
-
XM_054357184.1 → XP_054213159.1 probable E3 ubiquitin-protein ligase DTX2 isoform X1
- UniProtKB/TrEMBL
-
E7ET89
-
XM_054357195.1 → XP_054213170.1 probable E3 ubiquitin-protein ligase DTX2 isoform X3
- UniProtKB/TrEMBL
-
E7ET89
-
XM_054357192.1 → XP_054213167.1 probable E3 ubiquitin-protein ligase DTX2 isoform X2
- UniProtKB/TrEMBL
-
E7ET89
-
XM_054357196.1 → XP_054213171.1 probable E3 ubiquitin-protein ligase DTX2 isoform X4
- UniProtKB/TrEMBL
-
E7ET89
-
XM_054357193.1 → XP_054213168.1 probable E3 ubiquitin-protein ligase DTX2 isoform X2
- UniProtKB/TrEMBL
-
E7ET89
-
XM_054357189.1 → XP_054213164.1 probable E3 ubiquitin-protein ligase DTX2 isoform X1
- UniProtKB/TrEMBL
-
E7ET89
-
XM_054357191.1 → XP_054213166.1 probable E3 ubiquitin-protein ligase DTX2 isoform X1
- UniProtKB/TrEMBL
-
E7ET89
-
XM_054357183.1 → XP_054213158.1 probable E3 ubiquitin-protein ligase DTX2 isoform X1
- UniProtKB/TrEMBL
-
E7ET89
-
XM_054357194.1 → XP_054213169.1 probable E3 ubiquitin-protein ligase DTX2 isoform X2
- UniProtKB/TrEMBL
-
E7ET89
-
XM_054357190.1 → XP_054213165.1 probable E3 ubiquitin-protein ligase DTX2 isoform X1
- UniProtKB/TrEMBL
-
E7ET89
-
XM_054357197.1 → XP_054213172.1 probable E3 ubiquitin-protein ligase DTX2 isoform X6
-
XM_054357198.1 → XP_054213173.1 probable E3 ubiquitin-protein ligase DTX2 isoform X5
-
XM_054357186.1 → XP_054213161.1 probable E3 ubiquitin-protein ligase DTX2 isoform X1
- UniProtKB/TrEMBL
-
E7ET89