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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001282738.2 → NP_001269667.1 oxysterol-binding protein 2 isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses an alternate in-frame splice site, compared to variant 1. It initiates translation at an alternate start codon. The encoded isoform (c) is shorter and has a distinct N-terminus, compared to isoform a.
- Source sequence(s)
-
AB051451, AC004542, AK296525
- Consensus CDS
-
CCDS63446.1
- UniProtKB/TrEMBL
-
Q6ZN50
- Related
- ENSP00000411052.2, ENST00000438716.3
- Conserved Domains (3) summary
-
- pfam00169
Location:40 → 109
- PH; PH domain
- pfam01237
Location:356 → 730
- Oxysterol_BP; Oxysterol-binding protein
- cl17171
Location:50 → 115
- PH-like; Pleckstrin homology-like domain
-
NM_001282739.2 → NP_001269668.1 oxysterol-binding protein 2 isoform d
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses an alternate in-frame splice site, compared to variant 1. The encoded isoform (d) is shorter than isoform a.
- Source sequence(s)
-
AB051451, AC004542, AF323731, BC118914
- Consensus CDS
-
CCDS63448.1
- UniProtKB/TrEMBL
-
B4DFA8
- Related
- ENSP00000392080.2, ENST00000446658.6
- Conserved Domains (3) summary
-
- cd13284
Location:185 → 280
- PH_OSBP_ORP4; Human Oxysterol binding protein and OSBP-related protein 4 Pleckstrin homology (PH) domain
- pfam00169
Location:186 → 274
- PH; PH domain
- pfam01237
Location:521 → 895
- Oxysterol_BP; Oxysterol-binding protein
-
NM_001282740.2 → NP_001269669.1 oxysterol-binding protein 2 isoform e
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses an alternate in-frame splice site, compared to variant 1. It represents use of an internal promoter and initiates translation at a downstream in-frame start codon. The encoded isoform (e) is shorter than isoform a.
- Source sequence(s)
-
AB051451, AC004542, AK093196
- Consensus CDS
-
CCDS63450.1
- UniProtKB/TrEMBL
-
A0AAA9YHZ8
- Related
- ENSP00000385254.1, ENST00000401475.5
- Conserved Domains (1) summary
-
- pfam01237
Location:155 → 529
- Oxysterol_BP; Oxysterol-binding protein
-
NM_001282741.2 → NP_001269670.1 oxysterol-binding protein 2 isoform f
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses an alternate in-frame splice site, compared to variant 1. It represents use of an internal promoter and initiates translation at an alternate start codon. The encoded isoform (f) is shorter and has a distinct N-terminus, compared to isoform a.
- Source sequence(s)
-
AB051451, AC004542, AK296354
- Consensus CDS
-
CCDS63449.1
- UniProtKB/TrEMBL
-
A0A0A0MSB4
- Related
- ENSP00000389200.2, ENST00000437268.6
- Conserved Domains (1) summary
-
- pfam01237
Location:264 → 639
- Oxysterol_BP; Oxysterol-binding protein
-
NM_001282742.2 → NP_001269671.1 oxysterol-binding protein 2 isoform g
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses an alternate in-frame splice site, compared to variant 1. It represents use of an internal promoter and initiates translation at a downstream in-frame start codon. The encoded isoform (g) is shorter than isoform a.
- Source sequence(s)
-
AB051451, AK300323
- Consensus CDS
-
CCDS63451.1
- UniProtKB/TrEMBL
-
H7C428
- Related
- ENSP00000438713.1, ENST00000535268.5
- Conserved Domains (1) summary
-
- pfam01237
Location:66 → 440
- Oxysterol_BP; Oxysterol-binding protein
-
NM_030758.4 → NP_110385.1 oxysterol-binding protein 2 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a).
- Source sequence(s)
-
AB051451, AF323731
- Consensus CDS
-
CCDS43002.1
- UniProtKB/Swiss-Prot
- B0QYG1, B4DK24, B4DKE4, B4DTR3, F5H2A3, O60396, Q0VF99, Q8NA37, Q969R2, Q9BY96, Q9BZF0
- UniProtKB/TrEMBL
-
B4DFA8
- Related
- ENSP00000332576.6, ENST00000332585.11
- Conserved Domains (3) summary
-
- cd13284
Location:185 → 280
- PH_OSBP_ORP4; Human Oxysterol binding protein and OSBP-related protein 4 Pleckstrin homology (PH) domain
- pfam00169
Location:186 → 274
- PH; PH domain
- pfam01237
Location:522 → 896
- Oxysterol_BP; Oxysterol-binding protein
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000022.11 Reference GRCh38.p14 Primary Assembly
- Range
-
30693782..30907813
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060946.1 Alternate T2T-CHM13v2.0
- Range
-
31157371..31371381
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001003812.1: Suppressed sequence
- Description
- NM_001003812.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.