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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_008651.2 RefSeqGene
- Range
-
5081..35654
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_181
mRNA and Protein(s)
-
NM_001277126.2 → NP_001264055.1 NACHT, LRR and PYD domains-containing protein 12 isoform 3
See identical proteins and their annotated locations for NP_001264055.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) represents the longest transcript and encodes the longest isoform (3).
- Source sequence(s)
-
AC008753, AY116204, AY154467
- Consensus CDS
-
CCDS62785.1
- UniProtKB/TrEMBL
-
A8K407
- Related
- ENSP00000375653.1, ENST00000391773.8
- Conserved Domains (6) summary
-
- COG4886
Location:677 → 954
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- cd00116
Location:718 → 1036
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- cd08320
Location:13 → 92
- Pyrin_NALPs; Pyrin death domain found in NALP proteins
- sd00033
Location:716 → 744
- LRR_RI; leucine-rich repeat [structural motif]
- pfam05729
Location:212 → 381
- NACHT; NACHT domain
- pfam14484
Location:129 → 200
- FISNA; Fish-specific NACHT associated domain
-
NM_001277129.1 → NP_001264058.1 NACHT, LRR and PYD domains-containing protein 12 isoform 4
See identical proteins and their annotated locations for NP_001264058.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses an alternate in-frame splice site in the central coding region, and lacks an alternate in-frame exon in the 3' coding region, compared to variant 3. The encoded isoform (4) is shorter than isoform 3.
- Source sequence(s)
-
AK095460, AY154467, BC028069, DA619102
- Consensus CDS
-
CCDS62784.1
- UniProtKB/TrEMBL
-
A0A0C4DH17
- Related
- ENSP00000375655.3, ENST00000391775.7
- Conserved Domains (6) summary
-
- COG4886
Location:711 → 939
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- cd00116
Location:705 → 978
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- cd08320
Location:13 → 92
- Pyrin_NALPs; Pyrin death domain found in NALP proteins
- sd00033
Location:715 → 743
- LRR_RI; leucine-rich repeat [structural motif]
- pfam05729
Location:212 → 381
- NACHT; NACHT domain
- pfam14484
Location:129 → 200
- FISNA; Fish-specific NACHT associated domain
-
NM_144687.4 → NP_653288.1 NACHT, LRR and PYD domains-containing protein 12 isoform 2
See identical proteins and their annotated locations for NP_653288.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the central coding region, compared to variant 3, resulting in an isoform (2) that is 1 aa shorter than isoform 3.
- Source sequence(s)
-
AC008753, AY154467, BC028069
- Consensus CDS
-
CCDS12864.1
- UniProtKB/Swiss-Prot
- A8MTQ2, B3KTE7, P59046, Q8NEU4, Q9BY26
- UniProtKB/TrEMBL
-
A8K407
- Related
- ENSP00000319377.6, ENST00000324134.11
- Conserved Domains (6) summary
-
- cd00116
Location:717 → 1035
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- cd08320
Location:13 → 92
- Pyrin_NALPs; Pyrin death domain found in NALP proteins
- sd00033
Location:715 → 743
- LRR_RI; leucine-rich repeat [structural motif]
- pfam05729
Location:212 → 381
- NACHT; NACHT domain
- pfam14484
Location:129 → 200
- FISNA; Fish-specific NACHT associated domain
- cl26161
Location:561 → 866
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000019.10 Reference GRCh38.p14 Primary Assembly
- Range
-
53793584..53824403 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017027462.2 → XP_016882951.1 NACHT, LRR and PYD domains-containing protein 12 isoform X3
- UniProtKB/TrEMBL
-
A8K407
-
XM_047439676.1 → XP_047295632.1 NACHT, LRR and PYD domains-containing protein 12 isoform X8
- UniProtKB/TrEMBL
-
A0A0C4DFY3
-
XM_047439673.1 → XP_047295629.1 NACHT, LRR and PYD domains-containing protein 12 isoform X4
- UniProtKB/TrEMBL
-
A8K407
-
XM_047439675.1 → XP_047295631.1 NACHT, LRR and PYD domains-containing protein 12 isoform X7
- UniProtKB/TrEMBL
-
A0A0C4DFY3
-
XM_011527479.2 → XP_011525781.1 NACHT, LRR and PYD domains-containing protein 12 isoform X2
- UniProtKB/TrEMBL
-
A8K407
- Conserved Domains (6) summary
-
- COG4886
Location:712 → 954
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- cd00116
Location:688 → 979
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- cd08320
Location:13 → 92
- Pyrin_NALPs; Pyrin death domain found in NALP proteins
- sd00033
Location:716 → 744
- LRR_RI; leucine-rich repeat [structural motif]
- pfam05729
Location:212 → 381
- NACHT; NACHT domain
- pfam14484
Location:129 → 200
- FISNA; Fish-specific NACHT associated domain
-
XM_011527482.2 → XP_011525784.1 NACHT, LRR and PYD domains-containing protein 12 isoform X6
- UniProtKB/TrEMBL
-
A0A0C4DFY3
- Related
- ENSP00000375652.1, ENST00000391772.1
- Conserved Domains (6) summary
-
- COG4886
Location:712 → 843
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- cd00116
Location:705 → 922
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- cd08320
Location:13 → 92
- Pyrin_NALPs; Pyrin death domain found in NALP proteins
- sd00033
Location:716 → 744
- LRR_RI; leucine-rich repeat [structural motif]
- pfam05729
Location:212 → 381
- NACHT; NACHT domain
- pfam14484
Location:129 → 200
- FISNA; Fish-specific NACHT associated domain
-
XM_011527480.2 → XP_011525782.1 NACHT, LRR and PYD domains-containing protein 12 isoform X1
See identical proteins and their annotated locations for XP_011525782.1
- UniProtKB/TrEMBL
-
A0A0C4DH17
- Conserved Domains (6) summary
-
- COG4886
Location:712 → 940
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- cd00116
Location:688 → 979
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- cd08320
Location:13 → 92
- Pyrin_NALPs; Pyrin death domain found in NALP proteins
- sd00033
Location:716 → 744
- LRR_RI; leucine-rich repeat [structural motif]
- pfam05729
Location:212 → 381
- NACHT; NACHT domain
- pfam14484
Location:129 → 200
- FISNA; Fish-specific NACHT associated domain
-
XM_017027463.2 → XP_016882952.1 NACHT, LRR and PYD domains-containing protein 12 isoform X9
- UniProtKB/TrEMBL
-
A8K407
-
XM_017027465.2 → XP_016882954.1 NACHT, LRR and PYD domains-containing protein 12 isoform X9
- UniProtKB/TrEMBL
-
A8K407
-
XM_017027464.2 → XP_016882953.1 NACHT, LRR and PYD domains-containing protein 12 isoform X9
- UniProtKB/TrEMBL
-
A8K407
-
XM_017027467.2 → XP_016882956.1 NACHT, LRR and PYD domains-containing protein 12 isoform X9
- UniProtKB/TrEMBL
-
A8K407
-
XM_047439674.1 → XP_047295630.1 NACHT, LRR and PYD domains-containing protein 12 isoform X5
- UniProtKB/TrEMBL
-
A0A0C4DH17
Alternate T2T-CHM13v2.0
Genomic
-
NC_060943.1 Alternate T2T-CHM13v2.0
- Range
-
56873043..56904207 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054322598.1 → XP_054178573.1 NACHT, LRR and PYD domains-containing protein 12 isoform X3
- UniProtKB/TrEMBL
-
A8K407
-
XM_054322603.1 → XP_054178578.1 NACHT, LRR and PYD domains-containing protein 12 isoform X8
- UniProtKB/TrEMBL
-
A0A0C4DFY3
-
XM_054322599.1 → XP_054178574.1 NACHT, LRR and PYD domains-containing protein 12 isoform X4
- UniProtKB/TrEMBL
-
A8K407
-
XM_054322602.1 → XP_054178577.1 NACHT, LRR and PYD domains-containing protein 12 isoform X7
- UniProtKB/TrEMBL
-
A0A0C4DFY3
-
XM_054322597.1 → XP_054178572.1 NACHT, LRR and PYD domains-containing protein 12 isoform X2
- UniProtKB/TrEMBL
-
A8K407
-
XM_054322601.1 → XP_054178576.1 NACHT, LRR and PYD domains-containing protein 12 isoform X6
- UniProtKB/TrEMBL
-
A0A0C4DFY3
-
XM_054322596.1 → XP_054178571.1 NACHT, LRR and PYD domains-containing protein 12 isoform X1
- UniProtKB/TrEMBL
-
A0A0C4DH17
-
XM_054322604.1 → XP_054178579.1 NACHT, LRR and PYD domains-containing protein 12 isoform X9
- UniProtKB/TrEMBL
-
A8K407
-
XM_054322606.1 → XP_054178581.1 NACHT, LRR and PYD domains-containing protein 12 isoform X9
- UniProtKB/TrEMBL
-
A8K407
-
XM_054322605.1 → XP_054178580.1 NACHT, LRR and PYD domains-containing protein 12 isoform X9
- UniProtKB/TrEMBL
-
A8K407
-
XM_054322607.1 → XP_054178582.1 NACHT, LRR and PYD domains-containing protein 12 isoform X9
- UniProtKB/TrEMBL
-
A8K407
-
XM_054322600.1 → XP_054178575.1 NACHT, LRR and PYD domains-containing protein 12 isoform X5
- UniProtKB/TrEMBL
-
A0A0C4DH17
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_033297.2: Suppressed sequence
- Description
- NM_033297.2: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.