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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_054878.1 RefSeqGene
- Range
-
5437..20800
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001105563.3 → NP_001099033.1 coiled-coil alpha-helical rod protein 1 isoform 2
Status: REVIEWED
- Source sequence(s)
-
AL662844
- Consensus CDS
-
CCDS47397.1
- UniProtKB/TrEMBL
- A0A1U9X7G4, A0A1U9X7G6, A0A1U9X7G7, A0A1U9X7H0
- Related
- ENSP00000401039.2, ENST00000451521.6
- Conserved Domains (1) summary
-
- cl25732
Location:85 → 826
- SMC_N; RecF/RecN/SMC N terminal domain
-
NM_001105564.2 → NP_001099034.1 coiled-coil alpha-helical rod protein 1 isoform 1
Status: REVIEWED
- Source sequence(s)
-
AL662844
- Consensus CDS
-
CCDS43445.1
- UniProtKB/TrEMBL
-
A0A0G2JP87
- Related
- ENSP00000379566.3, ENST00000396268.8
- Conserved Domains (2) summary
-
- pfam07111
Location:116 → 862
- HCR; Alpha helical coiled-coil rod protein (HCR)
- cl19219
Location:309 → 390
- DUF342; Protein of unknown function (DUF342)
-
NM_001394641.1 → NP_001381570.1 coiled-coil alpha-helical rod protein 1 isoform 4
Status: REVIEWED
- Source sequence(s)
-
AL662844
- UniProtKB/TrEMBL
-
A0A0G2JP87
- Conserved Domains (1) summary
-
- pfam07111
Location:125 → 871
- HCR; Alpha helical coiled-coil rod protein (HCR)
-
NM_001394642.1 → NP_001381571.1 coiled-coil alpha-helical rod protein 1 isoform 3
Status: REVIEWED
- Source sequence(s)
-
AL662844
- Consensus CDS
-
CCDS4695.1
- UniProtKB/Swiss-Prot
- A2ABH6, E9PE84, Q2TB67, Q5SQ82, Q5STE9, Q8TD31, Q9NRK8, Q9NWY9, Q9NXJ4, Q9NXK3, Q9Y6W1, Q9Y6W2
- UniProtKB/TrEMBL
-
Q6IAC8
- Conserved Domains (1) summary
-
- pfam07111
Location:27 → 773
- HCR; Alpha helical coiled-coil rod protein (HCR)
-
NM_001394643.1 → NP_001381572.1 coiled-coil alpha-helical rod protein 1 isoform 3
Status: REVIEWED
- Source sequence(s)
-
AL662844
- Consensus CDS
-
CCDS4695.1
- UniProtKB/Swiss-Prot
- A2ABH6, E9PE84, Q2TB67, Q5SQ82, Q5STE9, Q8TD31, Q9NRK8, Q9NWY9, Q9NXJ4, Q9NXK3, Q9Y6W1, Q9Y6W2
- UniProtKB/TrEMBL
-
Q6IAC8
- Conserved Domains (1) summary
-
- pfam07111
Location:27 → 773
- HCR; Alpha helical coiled-coil rod protein (HCR)
-
NM_001394644.1 → NP_001381573.1 coiled-coil alpha-helical rod protein 1 isoform 3
Status: REVIEWED
- Source sequence(s)
-
AL662844
- Consensus CDS
-
CCDS4695.1
- UniProtKB/Swiss-Prot
- A2ABH6, E9PE84, Q2TB67, Q5SQ82, Q5STE9, Q8TD31, Q9NRK8, Q9NWY9, Q9NXJ4, Q9NXK3, Q9Y6W1, Q9Y6W2
- UniProtKB/TrEMBL
-
Q6IAC8
- Related
- ENSP00000379561.2, ENST00000396263.6
- Conserved Domains (1) summary
-
- pfam07111
Location:27 → 773
- HCR; Alpha helical coiled-coil rod protein (HCR)
-
NM_001394646.1 → NP_001381575.1 coiled-coil alpha-helical rod protein 1 isoform 5
Status: REVIEWED
- Source sequence(s)
-
AL662844
- UniProtKB/TrEMBL
-
Q6IAC8
- Conserved Domains (1) summary
-
- pfam07111
Location:27 → 770
- HCR; Alpha helical coiled-coil rod protein (HCR)
-
NM_001394647.1 → NP_001381576.1 coiled-coil alpha-helical rod protein 1 isoform 6
Status: REVIEWED
- Source sequence(s)
-
AL662844
- UniProtKB/TrEMBL
- Q0EFB6, Q2L6G6
- Conserved Domains (1) summary
-
- pfam07111
Location:1 → 747
- HCR; Alpha helical coiled-coil rod protein (HCR)
-
NM_001394648.1 → NP_001381577.1 coiled-coil alpha-helical rod protein 1 isoform 7
Status: REVIEWED
- Source sequence(s)
-
AL662844
- UniProtKB/TrEMBL
-
Q2TB68
- Conserved Domains (1) summary
-
- pfam07111
Location:1 → 737
- HCR; Alpha helical coiled-coil rod protein (HCR)
-
NM_001394649.1 → NP_001381578.1 coiled-coil alpha-helical rod protein 1 isoform 8
Status: REVIEWED
- Source sequence(s)
-
AL662844
- UniProtKB/TrEMBL
-
Q0EFB6
- Conserved Domains (1) summary
-
- pfam07111
Location:1 → 654
- HCR; Alpha helical coiled-coil rod protein (HCR)
-
NM_019052.4 → NP_061925.2 coiled-coil alpha-helical rod protein 1 isoform 3
See identical proteins and their annotated locations for NP_061925.2
Status: REVIEWED
- Source sequence(s)
-
AA356205, AB112474, AB112475, AK000533, BC110534, DC357362
- Consensus CDS
-
CCDS4695.1
- UniProtKB/Swiss-Prot
- A2ABH6, E9PE84, Q2TB67, Q5SQ82, Q5STE9, Q8TD31, Q9NRK8, Q9NWY9, Q9NXJ4, Q9NXK3, Q9Y6W1, Q9Y6W2
- UniProtKB/TrEMBL
-
Q6IAC8
- Related
- ENSP00000365442.5, ENST00000376266.9
- Conserved Domains (1) summary
-
- pfam07111
Location:27 → 773
- HCR; Alpha helical coiled-coil rod protein (HCR)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000006.12 Reference GRCh38.p14 Primary Assembly
- Range
-
31142439..31158197 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017010969.2 → XP_016866458.1 coiled-coil alpha-helical rod protein 1 isoform X2
- UniProtKB/TrEMBL
-
Q2TB68
- Conserved Domains (1) summary
-
- pfam07111
Location:1 → 737
- HCR; Alpha helical coiled-coil rod protein (HCR)
-
XM_017010968.2 → XP_016866457.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/Swiss-Prot
- A2ABH6, E9PE84, Q2TB67, Q5SQ82, Q5STE9, Q8TD31, Q9NRK8, Q9NWY9, Q9NXJ4, Q9NXK3, Q9Y6W1, Q9Y6W2
- UniProtKB/TrEMBL
-
Q6IAC8
- Conserved Domains (1) summary
-
- pfam07111
Location:27 → 773
- HCR; Alpha helical coiled-coil rod protein (HCR)
-
XM_047418911.1 → XP_047274867.1 coiled-coil alpha-helical rod protein 1 isoform X2
- UniProtKB/TrEMBL
-
Q2TB68
-
XM_011514705.2 → XP_011513007.1 coiled-coil alpha-helical rod protein 1 isoform X2
See identical proteins and their annotated locations for XP_011513007.1
- UniProtKB/TrEMBL
-
Q2TB68
- Conserved Domains (1) summary
-
- pfam07111
Location:1 → 737
- HCR; Alpha helical coiled-coil rod protein (HCR)
-
XM_017010966.2 → XP_016866455.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/Swiss-Prot
- A2ABH6, E9PE84, Q2TB67, Q5SQ82, Q5STE9, Q8TD31, Q9NRK8, Q9NWY9, Q9NXJ4, Q9NXK3, Q9Y6W1, Q9Y6W2
- UniProtKB/TrEMBL
-
Q6IAC8
- Conserved Domains (1) summary
-
- pfam07111
Location:27 → 773
- HCR; Alpha helical coiled-coil rod protein (HCR)
-
XM_047418908.1 → XP_047274864.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/Swiss-Prot
- A2ABH6, E9PE84, Q2TB67, Q5SQ82, Q5STE9, Q8TD31, Q9NRK8, Q9NWY9, Q9NXJ4, Q9NXK3, Q9Y6W1, Q9Y6W2
- UniProtKB/TrEMBL
-
Q6IAC8
-
XM_017010964.2 → XP_016866453.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/Swiss-Prot
- A2ABH6, E9PE84, Q2TB67, Q5SQ82, Q5STE9, Q8TD31, Q9NRK8, Q9NWY9, Q9NXJ4, Q9NXK3, Q9Y6W1, Q9Y6W2
- UniProtKB/TrEMBL
-
Q6IAC8
- Conserved Domains (1) summary
-
- pfam07111
Location:27 → 773
- HCR; Alpha helical coiled-coil rod protein (HCR)
-
XM_047418910.1 → XP_047274866.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/Swiss-Prot
- A2ABH6, E9PE84, Q2TB67, Q5SQ82, Q5STE9, Q8TD31, Q9NRK8, Q9NWY9, Q9NXJ4, Q9NXK3, Q9Y6W1, Q9Y6W2
- UniProtKB/TrEMBL
-
Q6IAC8
-
XM_047418909.1 → XP_047274865.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/Swiss-Prot
- A2ABH6, E9PE84, Q2TB67, Q5SQ82, Q5STE9, Q8TD31, Q9NRK8, Q9NWY9, Q9NXJ4, Q9NXK3, Q9Y6W1, Q9Y6W2
- UniProtKB/TrEMBL
-
Q6IAC8
-
XM_017010963.2 → XP_016866452.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/Swiss-Prot
- A2ABH6, E9PE84, Q2TB67, Q5SQ82, Q5STE9, Q8TD31, Q9NRK8, Q9NWY9, Q9NXJ4, Q9NXK3, Q9Y6W1, Q9Y6W2
- UniProtKB/TrEMBL
-
Q6IAC8
- Conserved Domains (1) summary
-
- pfam07111
Location:27 → 773
- HCR; Alpha helical coiled-coil rod protein (HCR)
-
XM_011514702.3 → XP_011513004.1 coiled-coil alpha-helical rod protein 1 isoform X5
See identical proteins and their annotated locations for XP_011513004.1
- UniProtKB/TrEMBL
- A0A1U9X7G4, A0A1U9X7G7, A0A1U9X7H0
- Conserved Domains (2) summary
-
- pfam07111
Location:94 → 835
- HCR; Alpha helical coiled-coil rod protein (HCR)
- cl19219
Location:282 → 363
- DUF342; Protein of unknown function (DUF342)
-
XM_047418914.1 → XP_047274870.1 coiled-coil alpha-helical rod protein 1 isoform X4
-
XM_047418913.1 → XP_047274869.1 coiled-coil alpha-helical rod protein 1 isoform X3
- Related
-
ENST00000509552.5
-
XM_047418912.1 → XP_047274868.1 coiled-coil alpha-helical rod protein 1 isoform X6
Reference GRCh38.p14 ALT_REF_LOCI_2
Genomic
-
NT_113891.3 Reference GRCh38.p14 ALT_REF_LOCI_2
- Range
-
2624870..2640625 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054329828.1 → XP_054185803.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- M1T2K8, Q769H0
-
XM_054329826.1 → XP_054185801.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- M1T2K8, Q769H0
-
XM_054329829.1 → XP_054185804.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- M1T2K8, Q769H0
-
XM_054329827.1 → XP_054185802.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- M1T2K8, Q769H0
-
XM_054329830.1 → XP_054185805.1 coiled-coil alpha-helical rod protein 1 isoform X2
- UniProtKB/TrEMBL
- M1TIV4, Q2TB68
-
XM_054329832.1 → XP_054185807.1 coiled-coil alpha-helical rod protein 1 isoform X4
-
XM_054329831.1 → XP_054185806.1 coiled-coil alpha-helical rod protein 1 isoform X3
Reference GRCh38.p14 ALT_REF_LOCI_3
Genomic
-
NT_167245.2 Reference GRCh38.p14 ALT_REF_LOCI_3
- Range
-
2401761..2417517 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054330312.1 → XP_054186287.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- M1T2K8, Q769H0
-
XM_054330310.1 → XP_054186285.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- M1T2K8, Q769H0
-
XM_054330313.1 → XP_054186288.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- M1T2K8, Q769H0
-
XM_054330311.1 → XP_054186286.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- M1T2K8, Q769H0
-
XM_054330314.1 → XP_054186289.1 coiled-coil alpha-helical rod protein 1 isoform X2
- UniProtKB/TrEMBL
- M1TIV4, Q2TB68
-
XM_054330316.1 → XP_054186291.1 coiled-coil alpha-helical rod protein 1 isoform X4
-
XM_054330315.1 → XP_054186290.1 coiled-coil alpha-helical rod protein 1 isoform X3
Reference GRCh38.p14 ALT_REF_LOCI_4
Genomic
-
NT_167246.2 Reference GRCh38.p14 ALT_REF_LOCI_4
- Range
-
2452954..2468732 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054330610.1 → XP_054186585.1 coiled-coil alpha-helical rod protein 1 isoform X2
- UniProtKB/TrEMBL
- D2IYK9, Q2TB68
-
XM_054330609.1 → XP_054186584.1 coiled-coil alpha-helical rod protein 1 isoform X2
- UniProtKB/TrEMBL
- D2IYK9, Q2TB68
-
XM_054330607.1 → XP_054186582.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- B0S7V6, Q6IAC8
-
XM_054330608.1 → XP_054186583.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- B0S7V6, Q6IAC8
-
XM_054330611.1 → XP_054186586.1 coiled-coil alpha-helical rod protein 1 isoform X2
- UniProtKB/TrEMBL
- D2IYK9, Q2TB68
-
XM_054330613.1 → XP_054186588.1 coiled-coil alpha-helical rod protein 1 isoform X4
-
XM_054330612.1 → XP_054186587.1 coiled-coil alpha-helical rod protein 1 isoform X3
Reference GRCh38.p14 ALT_REF_LOCI_5
Genomic
-
NT_167247.2 Reference GRCh38.p14 ALT_REF_LOCI_5
- Range
-
2486567..2502346 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054330830.1 → XP_054186805.1 coiled-coil alpha-helical rod protein 1 isoform X2
- UniProtKB/TrEMBL
- D2IYK9, Q2TB68
-
XM_054330829.1 → XP_054186804.1 coiled-coil alpha-helical rod protein 1 isoform X2
- UniProtKB/TrEMBL
- D2IYK9, Q2TB68
-
XM_054330827.1 → XP_054186802.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- B0S7V6, Q6IAC8
-
XM_054330828.1 → XP_054186803.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- B0S7V6, Q6IAC8
-
XM_054330831.1 → XP_054186806.1 coiled-coil alpha-helical rod protein 1 isoform X2
- UniProtKB/TrEMBL
- D2IYK9, Q2TB68
-
XM_054330833.1 → XP_054186808.1 coiled-coil alpha-helical rod protein 1 isoform X4
-
XM_054330832.1 → XP_054186807.1 coiled-coil alpha-helical rod protein 1 isoform X3
Reference GRCh38.p14 ALT_REF_LOCI_6
Genomic
-
NT_167248.2 Reference GRCh38.p14 ALT_REF_LOCI_6
- Range
-
2400454..2416229 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054331089.1 → XP_054187064.1 coiled-coil alpha-helical rod protein 1 isoform X8
- UniProtKB/TrEMBL
- B4DIA2, Q6IAC8
-
XM_054331091.1 → XP_054187066.1 coiled-coil alpha-helical rod protein 1 isoform X9
- UniProtKB/TrEMBL
-
Q2TB68
-
XM_054331090.1 → XP_054187065.1 coiled-coil alpha-helical rod protein 1 isoform X2
- UniProtKB/TrEMBL
-
Q2TB68
-
XM_054331087.1 → XP_054187062.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/Swiss-Prot
- A2ABH6, E9PE84, Q2TB67, Q5SQ82, Q5STE9, Q8TD31, Q9NRK8, Q9NWY9, Q9NXJ4, Q9NXK3, Q9Y6W1, Q9Y6W2
- UniProtKB/TrEMBL
-
Q6IAC8
-
XM_054331088.1 → XP_054187063.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/Swiss-Prot
- A2ABH6, E9PE84, Q2TB67, Q5SQ82, Q5STE9, Q8TD31, Q9NRK8, Q9NWY9, Q9NXJ4, Q9NXK3, Q9Y6W1, Q9Y6W2
- UniProtKB/TrEMBL
-
Q6IAC8
-
XM_054331086.1 → XP_054187061.1 coiled-coil alpha-helical rod protein 1 isoform X5
- UniProtKB/TrEMBL
- A0A1U9X7G4, A0A1U9X7G7, A0A1U9X7H0
-
XM_054331085.1 → XP_054187060.1 coiled-coil alpha-helical rod protein 1 isoform X7
- UniProtKB/TrEMBL
-
A0A0G2JP87
-
XM_054331093.1 → XP_054187068.1 coiled-coil alpha-helical rod protein 1 isoform X4
-
XM_054331092.1 → XP_054187067.1 coiled-coil alpha-helical rod protein 1 isoform X6
Alternate T2T-CHM13v2.0
Genomic
-
NC_060930.1 Alternate T2T-CHM13v2.0
- Range
-
31010125..31025917 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054355686.1 → XP_054211661.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- M1T2K8, Q769H0
-
XM_054355696.1 → XP_054211671.1 coiled-coil alpha-helical rod protein 1 isoform X2
- UniProtKB/TrEMBL
- M1TIV4, Q2TB68
-
XM_054355695.1 → XP_054211670.1 coiled-coil alpha-helical rod protein 1 isoform X2
- UniProtKB/TrEMBL
- M1TIV4, Q2TB68
-
XM_054355687.1 → XP_054211662.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- M1T2K8, Q769H0
-
XM_054355697.1 → XP_054211672.1 coiled-coil alpha-helical rod protein 1 isoform X2
- UniProtKB/TrEMBL
- M1TIV4, Q2TB68
-
XM_054355690.1 → XP_054211665.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- M1T2K8, Q769H0
-
XM_054355685.1 → XP_054211660.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- M1T2K8, Q769H0
-
XM_054355688.1 → XP_054211663.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- M1T2K8, Q769H0
-
XM_054355693.1 → XP_054211668.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- M1T2K8, Q769H0
-
XM_054355692.1 → XP_054211667.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- M1T2K8, Q769H0
-
XM_054355689.1 → XP_054211664.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- M1T2K8, Q769H0
-
XM_054355691.1 → XP_054211666.1 coiled-coil alpha-helical rod protein 1 isoform X1
- UniProtKB/TrEMBL
- M1T2K8, Q769H0
-
XM_054355694.1 → XP_054211669.1 coiled-coil alpha-helical rod protein 1 isoform X2
- UniProtKB/TrEMBL
- M1TIV4, Q2TB68
-
XM_054355700.1 → XP_054211675.1 coiled-coil alpha-helical rod protein 1 isoform X4
-
XM_054355699.1 → XP_054211674.1 coiled-coil alpha-helical rod protein 1 isoform X3
-
XM_054355698.1 → XP_054211673.1 coiled-coil alpha-helical rod protein 1 isoform X3
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001394645.1: Suppressed sequence
- Description
- NM_001394645.1: This RefSeq record was removed by NCBI staff. Contact [email protected] for further information.