NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001159640.2 → NP_001153112.1 threonine aspartase 1 isoform a
See identical proteins and their annotated locations for NP_001153112.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same isoform (a).
- Source sequence(s)
-
AK015624, BB791136, BC024597
- Consensus CDS
-
CCDS16802.1
- UniProtKB/Swiss-Prot
- Q8R1G1, Q99JP3
- Related
- ENSMUSP00000105706.3, ENSMUST00000110079.9
- Conserved Domains (1) summary
-
- cd04514
Location:42 → 416
- Taspase1_like; Taspase 1 (threonine aspartase 1) and similar proteins
-
NM_001159641.2 → NP_001153113.1 threonine aspartase 1 isoform b
See identical proteins and their annotated locations for NP_001153113.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and lacks an alternate in-frame exon in the 3' coding region, compared to variant 1. The resulting isoform (b) is shorter than isoform a.
- Source sequence(s)
-
AK015624, AK036512, AK132709, BB791136
- Consensus CDS
-
CCDS50731.1
- UniProtKB/TrEMBL
-
Q3UJT0
- Related
- ENSMUSP00000096907.4, ENSMUST00000099304.4
- Conserved Domains (1) summary
-
- cd04514
Location:42 → 379
- Taspase1_like; Taspase 1 (threonine aspartase 1) and similar proteins
-
NM_001289611.1 → NP_001276540.1 threonine aspartase 1 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) contains a 3' terminal exon which extends past a splice site that is used in variant 1. This results in a novel 3' coding region and 3' UTR, compared to variant 1. It encodes isoform c, which is shorter and has a distinct C-terminus, compared to isoform a.
- Source sequence(s)
-
AI662572, AK015624, AK050603, BB665115
- UniProtKB/Swiss-Prot
-
Q8R1G1
- Conserved Domains (1) summary
-
- cd04514
Location:42 → 162
- Taspase1_like; Taspase 1 (threonine aspartase 1) and similar proteins
-
NM_175225.5 → NP_780434.1 threonine aspartase 1 isoform a
See identical proteins and their annotated locations for NP_780434.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript. Variants 1 and 2 encode the same isoform (a).
- Source sequence(s)
-
AK015624, AK036512, BB791136
- Consensus CDS
-
CCDS16802.1
- UniProtKB/Swiss-Prot
- Q8R1G1, Q99JP3
- Related
- ENSMUSP00000039546.3, ENSMUST00000046656.9
- Conserved Domains (1) summary
-
- cd04514
Location:42 → 416
- Taspase1_like; Taspase 1 (threonine aspartase 1) and similar proteins
RNA
-
NR_110350.1 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) lacks an internal exon and uses an alternate splice site in a internal exon, compare to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK015624, AK160983, BB791136
-
NR_110351.1 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR and uses an alternate splice site in an internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK015624, AK160983, BB791136
-
NR_110352.1 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (7) differs in the 5' UTR, lacks an internal exon and uses an alternate splice site in an internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK015624, AK132709, BB791136