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    gly1 threonine aldolase Gly1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541852, updated on 18-Sep-2024

    Summary

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    Official Symbol
    gly1
    Official Full Name
    threonine aldolase Gly1
    Primary source
    PomBase:SPAC23H3.09c
    Locus tag
    SPOM_SPAC23H3.09C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See gly1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (2507707..2509546, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene AP-3 adaptor complex subunit Apl6 Neighboring gene ncRNA Neighboring gene mitochondrial 37S ribosomal protein uS14m Neighboring gene mitotic spindle checkpoint WD repeat protein Bub3 Neighboring gene ncRNA Neighboring gene tRNA-Cys Neighboring gene ncRNA Neighboring gene SWI/SNF and RSC complex subunit Ssr2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The novel proteins Rng8 and Rng9 regulate the myosin-V Myo51 during fission yeast cytokinesis. Wang N, et al. J Cell Biol, 2014 May 12. PMID 24798735, Free PMC Article
    2. A Two-step Protein Quality Control Pathway for a Misfolded DJ-1 Variant in Fission Yeast. Mathiassen SG, et al. J Biol Chem, 2015 Aug 21. PMID 26152728, Free PMC Article
    3. Proximity-dependent biotinylation mediated by TurboID to identify protein-protein interaction networks in yeast. Larochelle M, et al. J Cell Sci, 2019 May 31. PMID 31064814
    4. Transcription and chromatin-based surveillance mechanism controls suppression of cryptic antisense transcription. Heo DH, et al. Cell Rep, 2021 Sep 7. PMID 34496258, Free PMC Article
    5. Predicting the fission yeast protein interaction network. Pancaldi V, et al. G3 (Bethesda), 2012 Apr. PMID 22540037, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables L-allo-threonine aldolase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in glycine biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in threonine catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    threonine aldolase Gly1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      2507707..2509546 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019228.3 → NP_593799.1  threonine aldolase Gly1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593799.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O13940
      Conserved Domains (1) summary
      cd06502
      Location:30 → 353
      TA_like; Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a ...
    Nucleotide Protein
    Heading Accession and Version

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