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    cdb4 peptidase family curved DNA-binding protein Cdb4 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541817, updated on 18-Sep-2024

    Summary

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    Official Symbol
    cdb4
    Official Full Name
    peptidase family curved DNA-binding protein Cdb4
    Primary source
    PomBase:SPAC23H4.09
    Locus tag
    SPOM_SPAC23H4.09
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See cdb4 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (1591873..1593095, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene centromere localized protein Cnl2 Neighboring gene ncRNA Neighboring gene bifunctional thiamine-phosphate dipyrophosphorylase/hydroxyethylthiazole kinase Neighboring gene RNA polymerase II nuclear import protein Iwr1 Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and biochemical analysis of a mitochondrial endonuclease of Podospora anserina related to curved-DNA binding proteins. Laquel-Robert P, et al. Biochim Biophys Acta, 2007 Apr. PMID 17188431
    2. A fission yeast gene encoding a protein that preferentially associates with curved DNA. Yamada H, et al. Yeast, 1994 Jul. PMID 7985416
    3. Human Ebp1 rescues the synthetic lethal growth of fission yeast cells lacking Cdb4 and Nup184. Osemwenkhae OP, et al. Genes Cells, 2020 Apr. PMID 32049412
    4. Epe1 recruits BET family bromodomain protein Bdf2 to establish heterochromatin boundaries. Wang J, et al. Genes Dev, 2013 Sep 1. PMID 24013502, Free PMC Article
    5. Post-transcriptional regulation of meiotic genes by a nuclear RNA silencing complex. Egan ED, et al. RNA, 2014 Jun. PMID 24713849, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Human Ebp1 rescues the synthetic lethal growth of fission yeast cells lacking Cdb4 and Nup184.
      Title: Human Ebp1 rescues the synthetic lethal growth of fission yeast cells lacking Cdb4 and Nup184.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables nuclease activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 
    is_active_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peptidase family curved DNA-binding protein Cdb4

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      1591873..1593095 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001018829.3 → NP_593397.1  peptidase family curved DNA-binding protein Cdb4 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593397.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q09184
      Conserved Domains (1) summary
      cl00279
      Location:1 → 364
      APP_MetAP; A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity ...
    Nucleotide Protein
    Heading Accession and Version

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