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    dim1 U4/U6 x U5 tri-snRNP complex subunit Dim1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2539369, updated on 18-Sep-2024

    Summary

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    Official Symbol
    dim1
    Official Full Name
    U4/U6 x U5 tri-snRNP complex subunit Dim1
    Primary source
    PomBase:SPCC16A11.05c
    Locus tag
    SPOM_SPCC16A11.05C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See dim1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    5
    Sequence:
    Chromosome: III; NC_003421.2 (877804..878671, complement)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene sorting nexin Snx12 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pig-B family GPI synthesis protein Neighboring gene ncRNA Neighboring gene ubiquinone-binding protein Coq10

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Fission yeast dim1(+) encodes a functionally conserved polypeptide essential for mitosis. Berry LD, et al. J Cell Biol, 1997 Jun 16. PMID 9182666, Free PMC Article
    2. The schizosaccharomyces pombe dim1(+) gene interacts with the anaphase-promoting complex or cyclosome (APC/C) component lid1(+) and is required for APC/C function. Berry LD, et al. Mol Cell Biol, 1999 Apr. PMID 10082519, Free PMC Article
    3. Dim1p is required for efficient splicing and export of mRNA encoding lid1p, a component of the fission yeast anaphase-promoting complex. Carnahan RH, et al. Eukaryot Cell, 2005 Mar. PMID 15755920, Free PMC Article
    4. The histone variant H2A.Z promotes splicing of weak introns. Nissen KE, et al. Genes Dev, 2017 Apr 1. PMID 28446597, Free PMC Article
    5. Proteomic profiling and functional characterization of post-translational modifications of the fission yeast RNA exosome. Telekawa C, et al. Nucleic Acids Res, 2018 Nov 30. PMID 30321377, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in mRNA cis splicing, via spliceosome ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    part_of U4/U6 x U5 tri-snRNP complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of U5 snRNP IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of spliceosomal complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    U4/U6 x U5 tri-snRNP complex subunit Dim1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      877804..878671 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022983.3 → NP_587992.1  U4/U6 x U5 tri-snRNP complex subunit Dim1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_587992.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P87215
      Conserved Domains (1) summary
      pfam02966
      Location:4 → 136
      DIM1; Mitosis protein DIM1
    Nucleotide Protein
    Heading Accession and Version

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