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    rps5 40S ribosomal protein uS7 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542939, updated on 18-Sep-2024

    Summary

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    Official Symbol
    rps5
    Official Full Name
    40S ribosomal protein uS7
    Primary source
    PomBase:SPAC8C9.08
    Locus tag
    SPOM_SPAC8C9.08
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See rps5 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    2
    Sequence:
    Chromosome: I; NC_003424.3 (3655123..3656213)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene translation regulator Ppr4 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene rRNA processing protein Fyv7 Neighboring gene ncRNA Neighboring gene protein mug129 Neighboring gene ncRNA Neighboring gene ribosome biogenesis protein Rrp14-N Neighboring gene ncRNA Neighboring gene iron-sensor Fra2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteomic and functional analysis of the noncanonical poly(A) polymerase Cid14. Keller C, et al. RNA, 2010 Jun. PMID 20403971, Free PMC Article
    2. Predicting the fission yeast protein interaction network. Pancaldi V, et al. G3 (Bethesda), 2012 Apr. PMID 22540037, Free PMC Article
    3. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
    4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables mRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables rRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in cytoplasmic translation ISO
    Inferred from Sequence Orthology
    more info
    		  
    involved_in ribosomal small subunit assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in translation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    part_of cytosolic small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleolus HDA PubMed 
    is_active_in ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    40S ribosomal protein uS7

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      3655123..3656213
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019702.3 → NP_594279.1  40S ribosomal protein uS7 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594279.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O14277
      Conserved Domains (1) summary
      cd14867
      Location:19 → 203
      uS7_Eukaryote; Eukaryota homolog of Ribosomal Protein S7
    Nucleotide Protein
    Heading Accession and Version

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