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    qtr1 queuine tRNA-ribosyltransferase [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542133, updated on 18-Sep-2024

    Summary

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    Official Symbol
    qtr1
    Official Full Name
    queuine tRNA-ribosyltransferase
    Primary source
    PomBase:SPAC1687.19c
    Locus tag
    SPOM_SPAC1687.19C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    qtrt1
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    Genomic context

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    See qtr1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    3
    Sequence:
    Chromosome: I; NC_003424.3 (938311..939769, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene Der1 family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene cohesin loading factor Ssl3 Neighboring gene ncRNA Neighboring gene centromere connector protein mis6 Neighboring gene fructose-2,6-bisphosphatase Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Plant, animal, and fungal micronutrient queuosine is salvaged by members of the DUF2419 protein family. Zallot R, et al. ACS Chem Biol, 2014 Aug 15. PMID 24911101, Free PMC Article
    2. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables tRNA-guanosine(34) queuine transglycosylase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in tRNA-guanine transglycosylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in tRNA-guanine transglycosylation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    queuine tRNA-ribosyltransferase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      938311..939769 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001018534.3 → NP_593138.1  queuine tRNA-ribosyltransferase [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593138.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O94460
      Conserved Domains (2) summary
      COG0343
      Location:15 → 388
      Tgt; Queuine/archaeosine tRNA-ribosyltransferase [Translation, ribosomal structure and biogenesis]
      cl19224
      Location:6 → 378
      TGT; Queuine tRNA-ribosyltransferase
    Nucleotide Protein
    Heading Accession and Version

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