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    rpc17 DNA-directed RNA polymerase III complex subunit Rpc17 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2543653, updated on 18-Sep-2024

    Summary

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    Official Symbol
    rpc17
    Official Full Name
    DNA-directed RNA polymerase III complex subunit Rpc17
    Primary source
    PomBase:SPAPB1E7.10
    Locus tag
    SPOM_SPAPB1E7.10
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See rpc17 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (3316846..3317528)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene protein O-mannosyltransferase Ogm2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein Mpa1 Neighboring gene 40S ribosomal protein eS6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Crystal structure of the C17/25 subcomplex from Schizosaccharomyces pombe RNA polymerase III. Ehara H, et al. Protein Sci, 2011 Sep. PMID 21714024, Free PMC Article
    2. Ancient origin, functional conservation and fast evolution of DNA-dependent RNA polymerase III. Proshkina GM, et al. Nucleic Acids Res, 2006. PMID 16877568, Free PMC Article
    3. RNA processing factors Swd2.2 and Sen1 antagonize RNA Pol III-dependent transcription and the localization of condensin at Pol III genes. Legros P, et al. PLoS Genet, 2014 Nov. PMID 25392932, Free PMC Article
    4. Predicting the fission yeast protein interaction network. Pancaldi V, et al. G3 (Bethesda), 2012 Apr. PMID 22540037, Free PMC Article
    5. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables DNA-directed 5'-3' RNA polymerase activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transcription initiation at RNA polymerase III promoter IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in transcription initiation at RNA polymerase III promoter IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase III complex EXP
    Inferred from Experiment
    more info
    		 PubMed 
    part_of RNA polymerase III complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of RNA polymerase III complex IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    DNA-directed RNA polymerase III complex subunit Rpc17

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      3316846..3317528
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019560.3 → NP_594136.1  DNA-directed RNA polymerase III complex subunit Rpc17 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594136.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9C0Z9
      Conserved Domains (1) summary
      pfam03874
      Location:10 → 128
      RNA_pol_Rpb4; RNA polymerase Rpb4
    Nucleotide Protein
    Heading Accession and Version

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