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    alx1 BRO1 domain-containing protein [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541947, updated on 14-Nov-2024

    Summary

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    Official Symbol
    alx1
    Official Full Name
    BRO1 domain-containing protein
    Primary source
    PomBase:SPAC2G11.05c
    Locus tag
    SPOM_SPAC2G11.05C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    rim20
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    Genomic context

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    See alx1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (815388..817931, complement)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene vacuolar sorting protein Vps45 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene G-patch type RNA-binding protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene AAA family ATPase Vps4 Neighboring gene ncRNA Neighboring gene protein phosphatase PP2C catalytic subunit Ptc3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The yeast Alix homolog Bro1 functions as a ubiquitin receptor for protein sorting into multivesicular endosomes. Pashkova N, et al. Dev Cell, 2013 Jun 10. PMID 23726974, Free PMC Article
    2. Significant conservation of synthetic lethal genetic interaction networks between distantly related eukaryotes. Dixon SJ, et al. Proc Natl Acad Sci U S A, 2008 Oct 28. PMID 18931302, Free PMC Article
    3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in vesicle-mediated transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cell division site HDA PubMed 
    is_active_in cytosol HDA PubMed 
    is_active_in endosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in mitotic spindle pole body HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    BRO1 domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      815388..817931 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001018483.3 → NP_593085.1  BRO1 domain-containing protein [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593085.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q09807
      Conserved Domains (1) summary
      cd09241
      Location:2 → 354
      BRO1_ScRim20-like; Protein-interacting, N-terminal, Bro1-like domain of Saccharomyces cerevisiae Rim20 and related proteins
    Nucleotide Protein
    Heading Accession and Version

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