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    dfg501 mannan endo-1,6-alpha-mannosidase [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2539944, updated on 18-Sep-2024

    Summary

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    Official Symbol
    dfg501
    Official Full Name
    mannan endo-1,6-alpha-mannosidase
    Primary source
    PomBase:SPBC1198.06c
    Locus tag
    SPOM_SPBC1198.06C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    dfg5
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    Genomic context

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    See dfg501 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (182515..184585, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene tRNA-Gly Neighboring gene ncRNA Neighboring gene guanylate kinase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene mannan endo-1,6-alpha-mannosidase Neighboring gene ncRNA Neighboring gene dipeptidase Dug1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Generation and characterization of temperature-sensitive alleles encoding GPI anchored proteins Psu1 and Dfg502 in Schizosaccharomyces pombe. Tavafoghi B, et al. MicroPubl Biol, 2024. PMID 38633868, Free PMC Article
    2. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article
    3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables mannan endo-1,6-alpha-mannosidase activity ISM
    Inferred from Sequence Model
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in fungal-type cell wall biogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in septum digestion after cytokinesis IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in external side of plasma membrane ISO
    Inferred from Sequence Orthology
    more info
    		  

    General protein information

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    Preferred Names
    mannan endo-1,6-alpha-mannosidase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      182515..184585 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001020981.3 → NP_595075.1  mannan endo-1,6-alpha-mannosidase [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595075.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9P6I4
      Conserved Domains (1) summary
      pfam03663
      Location:30 → 373
      Glyco_hydro_76; Glycosyl hydrolase family 76
    Nucleotide Protein
    Heading Accession and Version

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