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    sog2 leucine-rich repeat protein Sog2 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541171, updated on 18-Sep-2024

    Summary

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    Official Symbol
    sog2
    Official Full Name
    leucine-rich repeat protein Sog2
    Primary source
    PomBase:SPBC887.09c
    Locus tag
    SPOM_SPBC887.09C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    lrp1
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    Genomic context

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    See sog2 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (3552680..3555656, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene sorting nexin Snx3 Neighboring gene uncharacterized protein Neighboring gene putative mitochondrial ribosomal protein subunit L38 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cross talk between NDR kinase pathways coordinates cytokinesis with cell separation in Schizosaccharomyces pombe. Gupta S, et al. Eukaryot Cell, 2014 Aug. PMID 24972934, Free PMC Article
    2. Fission yeast leucine-rich repeat protein Lrp1 is essential for cell morphogenesis as a component of the morphogenesis Orb6 network (MOR). Kume K, et al. Biosci Biotechnol Biochem, 2013. PMID 23649273
    3. Crosstalk between casein kinase II and Ste20-related kinase Nak1. Cipak L, et al. Cell Cycle, 2013 Mar 15. PMID 23462181, Free PMC Article
    4. Identification of SIN pathway targets reveals mechanisms of crosstalk between NDR kinase pathways. Gupta S, et al. Curr Biol, 2013 Feb 18. PMID 23394829, Free PMC Article
    5. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Lrp1 proved to function upstream of Orb6 in cell morphogenesis
      Title: Fission yeast leucine-rich repeat protein Lrp1 is essential for cell morphogenesis as a component of the morphogenesis Orb6 network (MOR).
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables signaling adaptor activity EXP
    Inferred from Experiment
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RAM/MOR signaling IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in positive regulation of establishment of bipolar cell polarity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cell division site HDA PubMed 
    is_active_in cell division site IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in cell tip HDA PubMed 
    is_active_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in cytosol HDA PubMed 
    is_active_in mitotic spindle pole body HDA PubMed 
    is_active_in mitotic spindle pole body IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat protein Sog2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      3552680..3555656 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022403.3 → NP_596483.1  leucine-rich repeat protein Sog2 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596483.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O94294
      Conserved Domains (4) summary
      sd00033
      Location:31 → 53
      LRR_RI; leucine-rich repeat [structural motif]
      pfam10428
      Location:505 → 812
      SOG2; RAM signalling pathway protein
      pfam12799
      Location:75 → 115
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:99 → 156
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version

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