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    avt5 vacuolar amino acid transmembrane transporter Avt5 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540081, updated on 18-Sep-2024

    Summary

    Official Symbol
    avt5
    Official Full Name
    vacuolar amino acid transmembrane transporter Avt5
    Primary source
    PomBase:SPBC1685.07c
    Locus tag
    SPOM_SPBC1685.07C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

    See avt5 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (509491..512849, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene serine protease Neighboring gene poly(A) polymerase Cid11 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by PomBase

    Component Evidence Code Pubs
    is_active_in fungal-type vacuole membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in fungal-type vacuole membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    vacuolar amino acid transmembrane transporter Avt5

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      509491..512849 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021118.3NP_595211.1  vacuolar amino acid transmembrane transporter Avt5 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595211.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O74327
      Conserved Domains (2) summary
      COG0814
      Location:11418
      SdaC; Amino acid permease [Amino acid transport and metabolism]
      cl00456
      Location:17409
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain