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    arp5 Ino80 complex actin-like protein Arp5 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541031, updated on 18-Sep-2024

    Summary

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    Official Symbol
    arp5
    Official Full Name
    Ino80 complex actin-like protein Arp5
    Primary source
    PomBase:SPBC365.10
    Locus tag
    SPOM_SPBC365.10
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See arp5 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    2
    Sequence:
    Chromosome: II; NC_003423.3 (2512585..2515047)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene small ubiquitin-like modifier pmt3 Neighboring gene Der1 family protein Neighboring gene KIN17-like protein Neighboring gene ncRNA Neighboring gene Golgi GRIP domain protein Grp2 Neighboring gene nuclear envelope Ish domain protein Ish1 Neighboring gene ncRNA Neighboring gene Ran GTPase-binding protein Hba1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Fission yeast Iec1-ino80-mediated nucleosome eviction regulates nucleotide and phosphate metabolism. Hogan CJ, et al. Mol Cell Biol, 2010 Feb. PMID 19933844, Free PMC Article
    2. The INO80 Complex Regulates Epigenetic Inheritance of Heterochromatin. Shan CM, et al. Cell Rep, 2020 Dec 29. PMID 33378674, Free PMC Article
    3. Rbm10 facilitates heterochromatin assembly via the Clr6 HDAC complex. Weigt M, et al. Epigenetics Chromatin, 2021 Jan 19. PMID 33468217, Free PMC Article
    4. Chromatin Central: towards the comparative proteome by accurate mapping of the yeast proteomic environment. Shevchenko A, et al. Genome Biol, 2008. PMID 19040720, Free PMC Article
    5. Posttranslational Arginylation Enzyme Arginyltransferase1 Shows Genetic Interactions With Specific Cellular Pathways in vivo. Wiley DJ, et al. Front Physiol, 2020. PMID 32435206, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in chromatin remodeling IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in transcription initiation-coupled chromatin remodeling IC
    Inferred by Curator
    more info
    		  
    Component Evidence Code Pubs
    part_of Ino80 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of Ino80 complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of Ino80 complex IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    Ino80 complex actin-like protein Arp5

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      2512585..2515047
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021949.3 → NP_596039.1  Ino80 complex actin-like protein Arp5 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596039.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9Y7X8
      Conserved Domains (1) summary
      COG5277
      Location:19 → 716
      COG5277; Actin-related protein [Cytoskeleton]
    Nucleotide Protein
    Heading Accession and Version

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