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    trans-aconitate 3-methyltransferase [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541658, updated on 18-Sep-2024

    Summary

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    Official Full Name
    trans-aconitate 3-methyltransferase
    Primary source
    PomBase:SPAC25B8.09
    Locus tag
    SPOM_SPAC25B8.09
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (4170524..4171657)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit Rcf1 Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene protein Smp1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene trans-aconitate 3-methyltransferase Neighboring gene transcription factor Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
    2. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables methyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables trans-aconitate 3-methyltransferase activity ISO
    Inferred from Sequence Orthology
    more info
    		  
    Process Evidence Code Pubs
    involved_in cellular detoxification ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in cellular response to amino acid starvation ISO
    Inferred from Sequence Orthology
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    trans-aconitate 3-methyltransferase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      4170524..4171657
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019898.3 → NP_594469.1  trans-aconitate 3-methyltransferase [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594469.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9UTA9
      Conserved Domains (1) summary
      pfam08241
      Location:41 → 132
      Methyltransf_11; Methyltransferase domain
    Nucleotide Protein
    Heading Accession and Version

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