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    pet127 RNA metabolism pathway protein Pet127 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2539021, updated on 18-Sep-2024

    Summary

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    Official Symbol
    pet127
    Official Full Name
    RNA metabolism pathway protein Pet127
    Primary source
    PomBase:SPCC1183.04c
    Locus tag
    SPOM_SPCC1183.04C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See pet127 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    2
    Sequence:
    Chromosome: III; NC_003421.2 (597500..599385, complement)

    Chromosome III - NC_003421.2Genomic Context describing neighboring genes Neighboring gene exocyst complex subunit Sec15 Neighboring gene ncRNA Neighboring gene glutathione S-transferase Neighboring gene ncRNA Neighboring gene frataxin Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene DNA repair ligase Lig4 Neighboring gene uracil DNA N-glycosylase Ung1 Neighboring gene protein Spo13

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003421.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. RNA degradation in fission yeast mitochondria is stimulated by a member of a new family of proteins that are conserved in lower eukaryotes. Wiesenberger G, et al. J Mol Biol, 2007 Mar 30. PMID 17292401
    2. The 3' ends of mature transcripts are generated by a processosome complex in fission yeast mitochondria. Hoffmann B, et al. J Mol Biol, 2008 Apr 4. PMID 18304578
    3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
    4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    5. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in mitochondrial RNA 5'-end processing IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in mitochondrial RNA catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in mitochondrial envelope IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in mitochondrial envelope IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    is_active_in mitochondrial matrix ISO
    Inferred from Sequence Orthology
    more info
    		  
    is_active_in mitochondrion HDA PubMed 

    General protein information

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    Preferred Names
    RNA metabolism pathway protein Pet127

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003421.2 Reference assembly

      Range
      597500..599385 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022879.3 → NP_587887.1  RNA metabolism pathway protein Pet127 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_587887.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O74832
      Conserved Domains (1) summary
      pfam08634
      Location:107 → 381
      Pet127; Mitochondrial protein Pet127
    Nucleotide Protein
    Heading Accession and Version

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