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    rvb2 chaperone, AAA family ATPase Rvb2 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541077, updated on 18-Sep-2024

    Summary

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    Official Symbol
    rvb2
    Official Full Name
    chaperone, AAA family ATPase Rvb2
    Primary source
    PomBase:SPBC83.08
    Locus tag
    SPOM_SPBC83.08
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See rvb2 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    2
    Sequence:
    Chromosome: II; NC_003423.3 (1523992..1525726)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene RNA-binding protein Yme2 Neighboring gene ncRNA Neighboring gene mitochondrial 54S ribosomal protein bL36m Neighboring gene Lid2 complex histone demethylase H3-K36 subunit Jmj3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene U5 snRNP complex subunit LIN1 Neighboring gene ncRNA Neighboring gene protein Emc7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Activity of a C-terminal plant homeodomain (PHD) of Msc1 is essential for function. Qiu X, et al. J Biol Chem, 2010 Nov 19. PMID 20858896, Free PMC Article
    2. CK2 phospho-independent assembly of the Tel2-associated stress-signaling complexes in Schizosaccharomyces pombe. Inoue H, et al. Genes Cells, 2017 Jan. PMID 27935167
    3. High-throughput knockout screen in Schizosaccharomyces pombe identifies a novel gene required for efficient homolog disjunction during meiosis I. Rumpf C, et al. Cell Cycle, 2010 May. PMID 20404563, Free PMC Article
    4. Histone variant H2A.Z regulates centromere silencing and chromosome segregation in fission yeast. Hou H, et al. J Biol Chem, 2010 Jan 15. PMID 19910462, Free PMC Article
    5. The Hsp90 cochaperone TTT promotes cotranslational maturation of PIKKs prior to complex assembly. Toullec D, et al. Cell Rep, 2021 Oct 19. PMID 34686329

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables ATP-dependent chromatin remodeler activity NAS
    Non-traceable Author Statement
    more info
    		  
    enables DNA helicase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in box C/D snoRNP assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in chromatin remodeling IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of Ino80 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of Ino80 complex IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    part_of NuA4 histone acetyltransferase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of R2TP complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of Swr1 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of Swr1 complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    chaperone, AAA family ATPase Rvb2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      1523992..1525726
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021534.3 → NP_595640.1  chaperone, AAA family ATPase Rvb2 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595640.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O94692
      Conserved Domains (2) summary
      COG1224
      Location:10 → 445
      TIP49; DNA helicase TIP49, TBP-interacting protein [Transcription]
      cl21455
      Location:68 → 118
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version

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