U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    pmt3 small ubiquitin-like modifier pmt3 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540927, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    pmt3
    Official Full Name
    small ubiquitin-like modifier pmt3
    Primary source
    PomBase:SPBC365.06
    Locus tag
    SPOM_SPBC365.06
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    smt3; ubl2
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See pmt3 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003423.3 (2506845..2510260)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene RNA-binding and ribosome biogenesis protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene splicing factor Slu7 Neighboring gene TATA element modulatory factor-like protein Neighboring gene Der1 family protein Neighboring gene KIN17-like protein Neighboring gene Ino80 complex actin-like protein Arp5 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Characterization of a fission yeast SUMO-1 homologue, pmt3p, required for multiple nuclear events, including the control of telomere length and chromosome segregation. Tanaka K, et al. Mol Cell Biol, 1999 Dec. PMID 10567589, Free PMC Article
    2. The telomere-binding protein Taz1p as a target for modification by a SUMO-1 homologue in fission yeast. Spink K, et al. Biochem Genet, 2005 Apr. PMID 15932060
    3. The fission yeast Stn1-Ten1 complex limits telomerase activity via its SUMO-interacting motif and promotes telomeres replication. Matmati S, et al. Sci Adv, 2018 May. PMID 29774234, Free PMC Article
    4. Targeting of SUMO substrates to a Cdc48-Ufd1-Npl4 segregase and STUbL pathway in fission yeast. Køhler JB, et al. Nat Commun, 2015 Nov 5. PMID 26537787, Free PMC Article
    5. Characterization of SUMO-conjugating enzyme mutants in Schizosaccharomyces pombe identifies a dominant-negative allele that severely reduces SUMO conjugation. Ho JC, et al. Biochem J, 2003 May 15. PMID 12597774, Free PMC Article

    See all (34) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Data show that pmt3 mutants exhibiting hypersensitivity to cisplatin.
      Title: Ubiquitin-proteasome genes as targets for modulation of cisplatin sensitivity in fission yeast.
    2. interaction between Taz1 and Pmt3p
      Title: The telomere-binding protein Taz1p as a target for modification by a SUMO-1 homologue in fission yeast.
    Submit: New GeneRIF Correction

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein tag activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables protein tag activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables ubiquitin-like protein ligase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in mitotic recombination-dependent replication fork processing IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in protein sumoylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in stalled replication fork localization to nuclear periphery IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in telomere maintenance IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in linear element IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in mitotic spindle pole body HDA PubMed 
    is_active_in mitotic spindle pole body IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in nucleus HDA PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in septin ring IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    small ubiquitin-like modifier pmt3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      2506845..2510260
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001355775.2 → NP_001342889.1  small ubiquitin-like modifier pmt3 [Schizosaccharomyces pombe]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O13351, O74186
      Conserved Domains (1) summary
      COG5227
      Location:1 → 114
      SMT3; Ubiquitin-like protein (sentrin) [Posttranslational modification, protein turnover, chaperones]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials