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    wbpJ glycosyl transferase WbpJ [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 882692, updated on 24-Aug-2024

    Summary

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    Gene symbol
    wbpJ
    Gene description
    glycosyl transferase WbpJ
    Locus tag
    PA3147
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (3530467..3531708, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene glycosyltransferase WbpL Neighboring gene NAD-dependent epimerase/dehydratase Neighboring gene UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimeras Neighboring gene glycosyltransferase WbpH Neighboring gene LPS biosynthesis protein WbpG

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Rapid evolution of culture-impaired bacteria during adaptation to biofilm growth. Penterman J, et al. Cell Rep, 2014 Jan 30. PMID 24412364, Free PMC Article
    2. Molecular characterization of the Pseudomonas aeruginosa serotype O5 (PAO1) B-band lipopolysaccharide gene cluster. Burrows LL, et al. Mol Microbiol, 1996 Nov. PMID 8939432
    3. The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics. Cantarel BL, et al. Nucleic Acids Res, 2009 Jan. PMID 18838391, Free PMC Article
    4. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    5. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within single-species biofilm formation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycosyl transferase WbpJ
    NP_251837.1
    • 'Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)'

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      3530467..3531708 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_251837.1 glycosyl transferase WbpJ [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_251837.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      P72143
      Conserved Domains (1) summary
      cd03794
      Location:2 → 404
      GT4_WbuB-like; Escherichia coli WbuB and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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