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    tsf elongation factor Ts [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 880592, updated on 11-Sep-2024

    Summary

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    Gene symbol
    tsf
    Gene description
    elongation factor Ts
    Locus tag
    PA3655
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (4093167..4094036, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene ribosome recycling factor Neighboring gene uridylate kinase Neighboring gene 30S ribosomal protein S2 Neighboring gene methionine aminopeptidase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The C-terminal Helix of Pseudomonas aeruginosa Elongation Factor Ts Tunes EF-Tu Dynamics to Modulate Nucleotide Exchange. De Laurentiis EI, et al. J Biol Chem, 2016 Oct 28. PMID 27624934, Free PMC Article
    2. Cloning and characterization of EF-Tu and EF-Ts from Pseudomonas aeruginosa. Palmer SO, et al. Biomed Res Int, 2013. PMID 23984384, Free PMC Article
    3. The structure of the Escherichia coli EF-Tu.EF-Ts complex at 2.5 A resolution. Kawashima T, et al. Nature, 1996 Feb 8. PMID 8596629
    4. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    5. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Helix 13 of EF-Ts is a regulatory element in the nucleotide exchange of the EF-Tu.EF-Ts binary complex.
      Title: The C-terminal Helix of Pseudomonas aeruginosa Elongation Factor Ts Tunes EF-Tu Dynamics to Modulate Nucleotide Exchange.
    2. genes encoding elongation factors EF-Tu and EF-Ts from Pseudomonas aeruginosa, were cloned.
      Title: Cloning and characterization of EF-Tu and EF-Ts from Pseudomonas aeruginosa.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Function Evidence Code Pubs
    enables translation elongation factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    elongation factor Ts
    NP_252345.1
    • Product name confidence: class 2 (High similarity to functionally studied protein)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      4093167..4094036 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_252345.1 elongation factor Ts [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_252345.1

      Status: PROVISIONAL

      Conserved Domains (1) summary
      PRK09377
      Location:1 → 276
      tsf; elongation factor Ts; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O82851.1

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