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    T05C3.6 Carb-bd_dom_fam9 domain-containing protein;PLD phosphodiesterase domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 178931, updated on 9-Dec-2024

    Summary

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    Official Symbol
    T05C3.6
    Official Full Name
    Carb-bd_dom_fam9 domain-containing protein;PLD phosphodiesterase domain-containing protein
    Primary source
    WormBase:WBGene00020256
    Locus tag
    CELE_T05C3.6
    See related
    AllianceGenome:WB:WBGene00020256
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable catalytic activity. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See T05C3.6 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    9
    Sequence:
    Chromosome: V; NC_003283.11 (5490445..5493646)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Serpentine receptor class gamma Neighboring gene Ground-like domain-containing protein Neighboring gene NACHT domain-containing protein Neighboring gene DNaJ domain (prokaryotic heat shock protein)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Carb-bd_dom_fam9 domain-containing protein;PLD phosphodiesterase domain-containing protein
    NP_001123000.1
    • Confirmed by transcript evidence
    NP_001123001.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      5490445..5493646
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001129528.4 → NP_001123000.1  PLD phosphodiesterase domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001123000.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZ05
      Conserved Domains (3) summary
      cd09106
      Location:76 → 236
      PLDc_vPLD3_4_5_like_1; Putative catalytic domain, repeat 1, of vertebrate phospholipases, PLD3, PLD4 and PLD5, viral envelope proteins K4 and p37, and similar proteins
      cd09107
      Location:290 → 483
      PLDc_vPLD3_4_5_like_2; Putative catalytic domain, repeat 2, of vertebrate phospholipases, PLD3, PLD4 and PLD5, viral envelope proteins K4 and p37, and similar proteins
      PHA02820
      Location:68 → 498
      PHA02820; phospholipase-D-like protein; Provisional

    2. NM_001129529.4 → NP_001123001.1  Carb-bd_dom_fam9 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001123001.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A6PVA4
      Conserved Domains (1) summary
      cl15239
      Location:76 → 132
      PLDc_SF; Catalytic domain of phospholipase D superfamily proteins
    Nucleotide Protein
    Heading Accession and Version

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