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    T09F3.5 RNase H type-1 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 3565885, updated on 9-Dec-2024

    Summary

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    Official Symbol
    T09F3.5
    Official Full Name
    RNase H type-1 domain-containing protein
    Primary source
    WormBase:WBGene00011664
    Locus tag
    CELE_T09F3.5
    See related
    AllianceGenome:WB:WBGene00011664
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable RNA-DNA hybrid ribonuclease activity. Predicted to be involved in DNA replication, removal of RNA primer. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See T09F3.5 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    6
    Sequence:
    Chromosome: II; NC_003280.10 (10396878..10399320)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Glyceraldehyde-3-phosphate dehydrogenase 1 Neighboring gene 39S ribosomal protein L22, mitochondrial Neighboring gene Neuropeptide-Like Protein Neighboring gene Eukaryotic translation initiation factor 2A Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables RNA-DNA hybrid ribonuclease activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA replication, removal of RNA primer IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    RNase H type-1 domain-containing protein
    NP_001022338.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      10396878..10399320
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001027167.7 → NP_001022338.1  RNase H type-1 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001022338.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7YTF8
      Conserved Domains (1) summary
      cl14782
      Location:236 → 319
      RNase_H_like; Ribonuclease H-like superfamily, including RNase H, HI, HII, HIII, and RNase-like domain IV of spliceosomal protein Prp8
    Nucleotide Protein
    Heading Accession and Version

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