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    srxa-6 Serpentine Receptor, class T [ Caenorhabditis elegans ]

    Gene ID: 189273, updated on 9-Dec-2024

    Summary

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    Official Symbol
    srxa-6
    Official Full Name
    Serpentine Receptor, class T
    Primary source
    WormBase:WBGene00012321
    Locus tag
    CELE_W07A8.5
    See related
    AllianceGenome:WB:WBGene00012321
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Is expressed in intestine and nervous system. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See srxa-6 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    5
    Sequence:
    Chromosome: V; NC_003283.11 (20734958..20736180)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene J domain-containing protein Neighboring gene G_PROTEIN_RECEP_F1_2 domain-containing protein Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Defective pharyngeal development protein 4 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Increased gene dosage and mRNA expression from chromosomal duplications in Caenorhabditis elegans. Ragipani B, et al. G3 (Bethesda), 2022 Jul 29. PMID 35731207, Free PMC Article
    2. A soma-to-germline transformation in long-lived Caenorhabditis elegans mutants. Curran SP, et al. Nature, 2009 Jun 25. PMID 19506556, Free PMC Article
    3. Identification of genes that protect the C. elegans genome against mutations by genome-wide RNAi. Pothof J, et al. Genes Dev, 2003 Feb 15. PMID 12600937, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine Receptor, class T
    NP_508005.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      20734958..20736180
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_075604.2 → NP_508005.1  Serpentine Receptor, class T [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_508005.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9U335
      Conserved Domains (1) summary
      pfam03383
      Location:42 → 193
      Serpentine_r_xa; Caenorhabditis serpentine receptor-like protein, class xa
    Nucleotide Protein
    Heading Accession and Version

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