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    mam-5 MAM domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 188217, updated on 9-Dec-2024

    Summary

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    Official Symbol
    mam-5
    Official Full Name
    MAM domain-containing protein
    Primary source
    WormBase:WBGene00011572
    Locus tag
    CELE_T07C12.8
    See related
    AllianceGenome:WB:WBGene00011572
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See mam-5 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    10
    Sequence:
    Chromosome: V; NC_003283.11 (9952699..9956928)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Neuropeptide-Like Protein Neighboring gene Transthyretin-like protein 46 Neighboring gene Nicotinamide N-methyltransferase-like Neighboring gene ncRNA Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Intestinal tube formation in Caenorhabditis elegans requires vang-1 and egl-15 signaling. Hoffmann M, et al. Dev Biol, 2010 Mar 15. PMID 20004187
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    MAM domain-containing protein
    NP_001256155.1
    • Confirmed by transcript evidence
    NP_001256156.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      9952699..9956928
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001269226.4 → NP_001256155.1  MAM domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256155.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E3W738
      Conserved Domains (2) summary
      smart00137
      Location:26 → 185
      MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
      cl27660
      Location:280 → 438
      MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...

    2. NM_001269227.4 → NP_001256156.1  MAM domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256156.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E3W739
      Conserved Domains (1) summary
      smart00137
      Location:26 → 185
      MAM; Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
    Nucleotide Protein
    Heading Accession and Version

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