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    C01F1.5 Peptidase M12A domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 182069, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C01F1.5
    Official Full Name
    Peptidase M12A domain-containing protein
    Primary source
    WormBase:WBGene00015300
    Locus tag
    CELE_C01F1.5
    See related
    AllianceGenome:WB:WBGene00015300
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable metallopeptidase activity. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C01F1.5 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    3
    Sequence:
    Chromosome: II; NC_003280.10 (4279424..4281845, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene C-type lectin domain-containing protein Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene ANK_REP_REGION domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene NAD(P)-bd_dom domain-containing protein;NAD(P)-binding domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables metallopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Peptidase M12A domain-containing protein
    NP_494752.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      4279424..4281845 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_062351.3 → NP_494752.1  Peptidase M12A domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494752.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q17554
      Conserved Domains (1) summary
      cl00064
      Location:62 → 99
      ZnMc; Zinc-dependent metalloprotease. This super-family of metalloproteases contains two major branches, the astacin-like proteases and the adamalysin/reprolysin-like proteases. Both branches have wide phylogenetic distribution, and contain sub-families, which ...
    Nucleotide Protein
    Heading Accession and Version

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