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    capa-1 LYMARV-amide [ Caenorhabditis elegans ]

    Gene ID: 189521, updated on 9-Dec-2024

    Summary

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    Official Symbol
    capa-1
    Official Full Name
    LYMARV-amide
    Primary source
    WormBase:WBGene00021268
    Locus tag
    CELE_Y23B4A.2
    See related
    AllianceGenome:WB:WBGene00021268
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Enables G protein-coupled receptor binding activity. Involved in neuropeptide signaling pathway. Is expressed in neurons. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See capa-1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    3
    Sequence:
    Chromosome: X; NC_003284.9 (5919760..5920494)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Neuromedin U signaling regulates retrieval of learned salt avoidance in a C. elegans gustatory circuit. Watteyne J, et al. Nat Commun, 2020 Apr 29. PMID 32350283, Free PMC Article
    2. A neuromedin-pyrokinin-like neuropeptide signaling system in Caenorhabditis elegans. Lindemans M, et al. Biochem Biophys Res Commun, 2009 Feb 13. PMID 19133232
    3. Most Caenorhabditis elegans microRNAs are individually not essential for development or viability. Miska EA, et al. PLoS Genet, 2007 Dec. PMID 18085825, Free PMC Article
    4. The neuropeptidergic connectome of C. elegans. Ripoll-Sánchez L, et al. Neuron, 2023 Nov 15. PMID 37935195, Free PMC Article
    5. System-wide mapping of peptide-GPCR interactions in C. elegans. Beets I, et al. Cell Rep, 2023 Sep 26. PMID 37656621, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The neuromedin U homolog CAPA-1 and its receptor NMUR-1 are required for the retrieval of learned salt avoidance.
      Title: Neuromedin U signaling regulates retrieval of learned salt avoidance in a C. elegans gustatory circuit.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables G protein-coupled receptor binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in neuropeptide signaling pathway IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in neuropeptide signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    LYMARV-amide
    NP_001370577.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      5919760..5920494
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001383591.2 → NP_001370577.1  LYMARV-amide [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9N563
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9N563.1

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