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    srt-55 Serpentine receptor class T-55 [ Caenorhabditis elegans ]

    Gene ID: 188561, updated on 9-Dec-2024

    Summary

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    Official Symbol
    srt-55
    Official Full Name
    Serpentine receptor class T-55
    Primary source
    WormBase:WBGene00011816
    Locus tag
    CELE_T16H12.8
    See related
    AllianceGenome:WB:WBGene00011816
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See srt-55 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    6
    Sequence:
    Chromosome: III; NC_003281.10 (10104841..10106490, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Kelch repeat-containing protein kel-10 Neighboring gene pseudo Neighboring gene Uncharacterized protein Neighboring gene Vacuolar protein sorting-associated protein 29 Neighboring gene Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine receptor class T-55
    NP_499243.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      10104841..10106490 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_066842.1 → NP_499243.1  Serpentine receptor class T-55 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_499243.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34571
      Conserved Domains (1) summary
      pfam10321
      Location:48 → 337
      7TM_GPCR_Srt; Serpentine type 7TM GPCR chemoreceptor Srt
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P34571.1

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