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    • Showing Current items.

    str-13 Seven TM Receptor [ Caenorhabditis elegans ]

    Gene ID: 191968, updated on 9-Dec-2024

    Summary

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    Official Symbol
    str-13
    Official Full Name
    Seven TM Receptor
    Primary source
    WormBase:WBGene00006081
    Locus tag
    CELE_C24B9.8
    See related
    AllianceGenome:WB:WBGene00006081
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See str-13 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (2725902..2727201, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Serpentine receptor class gamma Neighboring gene Serpentine receptor class gamma Neighboring gene G-protein coupled receptor str-33 Neighboring gene Downstream Of DAF-16 (regulated by DAF-16)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Updating the str and srj (stl) families of chemoreceptors in Caenorhabditis nematodes reveals frequent gene movement within and between chromosomes. Robertson HM. Chem Senses, 2001 Feb. PMID 11238245
    2. Analysis of xbx genes in C. elegans. Efimenko E, et al. Development, 2005 Apr. PMID 15790967
    3. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Seven TM Receptor
    NP_503740.1
    • Predicted

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      2725902..2727201 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_071339.1 → NP_503740.1  Seven TM Receptor [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_503740.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O76436
      Conserved Domains (1) summary
      pfam10326
      Location:12 → 312
      7TM_GPCR_Str; Serpentine type 7TM GPCR chemoreceptor Str
    Nucleotide Protein
    Heading Accession and Version

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