commd7 COMM domain containing 7 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: commd7provided by ZNC
Official Full Name: COMM domain containing 7provided by ZNC
Primary source: ZFIN:ZDB-GENE-040801-96
See related: Ensembl:ENSDARG00000036784 AllianceGenome:ZFIN:ZDB-GENE-040801-96
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:101056
Summary: Predicted to enable NF-kappaB binding activity. Predicted to be involved in tumor necrosis factor-mediated signaling pathway. Orthologous to human COMMD7 (COMM domain containing 7). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 23

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	23	NC_007134.7 (17102962..17114092)
105	previous assembly	GRCz10 (GCF_000002035.5)	23	NC_007134.6 (17176619..17187749)

Chromosome 23 - NC_007134.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fb30e11 (e-PCR)
- UniSTS:189011

fb30e11.x1 (e-PCR)
- UniSTS:203103

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables NF-kappaB binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in tumor necrosis factor-mediated signaling pathway	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: COMM domain-containing protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001003577.1 → NP_001003577.1 COMM domain-containing protein 7

Status: PROVISIONAL

Source sequence(s)

BC078326

UniProtKB/TrEMBL

Q6DBX2

Related

ENSDARP00000053413.4, ENSDART00000053414.5

Conserved Domains (1) summary

cd04755
Location:19 → 198

Commd7; COMM_Domain containing protein 7. The COMM Domain is found at the C-terminus of a variety of proteins; presumably all COMM_Domain containing proteins are located in the nucleus and the COMM domain plays a role in protein-protein interactions. Several ...