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    CG3777 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 30979, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG3777provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0024989
    Locus tag
    Dmel_CG3777
    See related
    AllianceGenome:FB:FBgn0024989
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BEST:CK01670; CK01670; Dmel\CG3777; EG:125H10.1
    Summary
    Is expressed in several structures, including adult brain; embryonic esophagus; embryonic head epidermis; epithelium; and primary segmental tracheal branch primordium. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG3777 in Genome Data Viewer
    Location:
    1A1-1A5; 1-0 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (279703..350504)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (173736..244537)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR43906 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene cinnamon Neighboring gene erect wing Neighboring gene mir-980 stem loop Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Odorant receptor 1a Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mapping the D.melanogaster En1A Enhancer Modules Responsible for Transcription Activation and Long-Distance Enhancer-Promoter Interactions. Melnikova LS, et al. Acta Naturae, 2017 Jan-Mar. PMID 28461980, Free PMC Article
    2. Recombination, dominance and selection on amino acid polymorphism in the Drosophila genome: contrasting patterns on the X and fourth chromosomes. Sheldahl LA, et al. Genetics, 2003 Nov. PMID 14668375, Free PMC Article
    3. Genes Containing Long Introns Occupy Series of Bands and Interbands In Drosophila melanogaster polytene Chromosomes. Khoroshko VA, et al. Genes (Basel), 2020 Apr 11. PMID 32290448, Free PMC Article
    4. Stress-dependent miR-980 regulation of Rbfox1/A2bp1 promotes ribonucleoprotein granule formation and cell survival. Kucherenko MM, et al. Nat Commun, 2018 Jan 22. PMID 29358748, Free PMC Article
    5. Identification of expressed transposable element insertions in the sequenced genome of Drosophila melanogaster. Deloger M, et al. Gene, 2009 Jun 15. PMID 19332112

    See all (35) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    mobile_element

    • Loc: 280581-280653 mobile_element_type = transposon:hopper{}4748
    • Loc: 288160-288193 mobile_element_type = transposon:INE-1{}4709
    • Loc: 288373-288501 mobile_element_type = transposon:INE-1{}4710
    • Loc: 305687-305788 mobile_element_type = transposon:INE-1{}4723
    • Loc: 318526-323554 mobile_element_type = transposon:flea{}3
    • Loc: 329566-329659 mobile_element_type = transposon:INE-1{}4728
    • Loc: 335134-335160 mobile_element_type = transposon:INE-1{}4807

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG3777-PA
    CG3777-PB
    CG3777-PC
    CG3777-PD
    CG3777-PE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      279703..350504
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130483.3 → NP_569839.2  uncharacterized protein Dmel_CG3777, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_569839.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O76874, Q7K7G5
      Related
      FBpp0070065

    2. NM_001297804.1 → NP_001284733.1  uncharacterized protein Dmel_CG3777, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001284733.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O76874, Q7K7G5

    3. NM_001297805.1 → NP_001284734.1  uncharacterized protein Dmel_CG3777, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001284734.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O76874, Q7K7G5

    4. NM_166841.2 → NP_726665.2  uncharacterized protein Dmel_CG3777, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_726665.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O76874, Q7K7G5
      Related
      FBpp0070067
      Conserved Domains (1) summary
      pfam07227
      Location:262 → 367
      DUF1423; Protein of unknown function (DUF1423)

    5. NM_166840.2 → NP_726664.2  uncharacterized protein Dmel_CG3777, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_726664.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O76874, Q7K7G5
      Related
      FBpp0070066
      Conserved Domains (1) summary
      pfam07227
      Location:262 → 367
      DUF1423; Protein of unknown function (DUF1423)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O76874 O76874
    Q6W4F2 Q6W4F2
    Q6W4G1 Q6W4G1
    Q6W4G4 Q6W4G4
    Q6W4G7 Q6W4G7
    Q6W4H2 Q6W4H2
    Q7K7G5 Q7K7G5

    Gene LinkOut

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