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    CG2225 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35421, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG2225provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032957
    Locus tag
    Dmel_CG2225
    See related
    AllianceGenome:FB:FBgn0032957
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG2225
    Summary
    Is expressed in embryonic brain; larval nervous system; and larval ventral nerve cord. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG2225 in Genome Data Viewer
    Location:
    39E6-39E7; 2-54 cM
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (21663806..21677530, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (21663806..21677530, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43144 Neighboring gene antisense RNA:CR46066 Neighboring gene Cullin 2 Neighboring gene small non-coding RNA 254 Neighboring gene eukaryotic translation elongation factor 2 Neighboring gene no long nerve cord

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Single-nucleus RNA-sequencing in pre-cellularization Drosophila melanogaster embryos. Albright AR, et al. PLoS One, 2022. PMID 35749552, Free PMC Article
    2. Shared enhancer gene regulatory networks between wound and oncogenic programs. Floc'hlay S, et al. Elife, 2023 May 3. PMID 37133250, Free PMC Article
    3. Genome-wide identification and characterization of tissue-specific RNA editing events in D. melanogaster and their potential role in regulating alternative splicing. Mazloomian A, et al. RNA Biol, 2015. PMID 26512413, Free PMC Article
    4. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
    5. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    mobile_element

    • Loc: c21667158-21666837 mobile_element_type = transposon:INE-1{}4743
    • Loc: c21670041-21669978 mobile_element_type = transposon:INE-1{}4753
    • Loc: c21672039-21671859 mobile_element_type = transposon:INE-1{}4754
    • Loc: c21675112-21673477 mobile_element_type = transposon:HB{}512
    • Loc: c21676457-21675224 mobile_element_type = transposon:HB{}2269

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG2225-PA
    CG2225-PB
    CG2225-PC
    CG2225-PE
    CG2225-PF
    CG2225-PG
    CG2225-PH

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      21663806..21677530 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273748.1 → NP_001260677.1  uncharacterized protein Dmel_CG2225, isoform H [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260677.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q59DT1

    2. NM_206020.3 → NP_995742.2  uncharacterized protein Dmel_CG2225, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_995742.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7YTZ2, Q9V9R1

    3. NM_001259198.2 → NP_001246127.1  uncharacterized protein Dmel_CG2225, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246127.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7YTZ2, Q9V9R1

    4. NM_165392.3 → NP_724355.2  uncharacterized protein Dmel_CG2225, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724355.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7YTZ2, Q9V9R1

    5. NM_165393.3 → NP_724356.2  uncharacterized protein Dmel_CG2225, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724356.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q59DT1

    6. NM_001014497.2 → NP_001014497.1  uncharacterized protein Dmel_CG2225, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001014497.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7KRS5

    7. NM_136274.3 → NP_610118.2  uncharacterized protein Dmel_CG2225, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610118.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IMF2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q59DT1 Q59DT1
    Q7KRS5 Q7KRS5
    Q8IMF2 Q8IMF2
    Q9V9R1 Q9V9R1

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