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    Cpr50Ca Cuticular protein 50Ca [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36523, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Cpr50Caprovided by FlyBase
    Official Full Name
    Cuticular protein 50Caprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033867
    Locus tag
    Dmel_CG13338
    See related
    AllianceGenome:FB:FBgn0033867
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG13338; Dmel\CG13338
    Summary
    Predicted to be a structural constituent of chitin-based larval cuticle. Predicted to be involved in chitin-based cuticle development. Predicted to be located in chitin-based extracellular matrix. Predicted to be active in extracellular matrix. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Cpr50Ca in Genome Data Viewer
    Location:
    50C3-50C5; 2-68 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (13769915..13787802)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (9657420..9675307)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene teiresias Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43810 Neighboring gene long non-coding RNA:CR43811 Neighboring gene Sperm-Leucylaminopeptidase 7 Neighboring gene Cuticular protein 50Cb

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables structural constituent of chitin-based larval cuticle ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chitin-based cuticle development ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chitin-based extracellular matrix ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    is_active_in extracellular matrix IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    cuticular protein 50Ca
    Names
    CG13338-PA
    Cpr50Ca-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      13769915..13787802
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137055.3 → NP_610899.1  cuticular protein 50Ca [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610899.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7JZ94
      Related
      FBpp0086755
      Conserved Domains (1) summary
      pfam00379
      Location:751 → 803
      Chitin_bind_4; Insect cuticle protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7JZ94 Q7JZ94

    Gene LinkOut

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