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    CG31221 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42325, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG31221provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0051221
    Locus tag
    Dmel_CG31221
    See related
    AllianceGenome:FB:FBgn0051221
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-EST:Posey251; BcDNA:GH25289; CG11625; CG7237; Dmel\CG31221
    Summary
    Is expressed in several structures, including adult head; embryonic/larval fat body; embryonic/larval midgut primordium; larval ventral nerve cord; and lateral cord surface glial cell. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG31221 in Genome Data Viewer
    Location:
    92A3-92A5; 3-66 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (19412689..19460311)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (15238411..15286033)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene aprataxin Neighboring gene uncharacterized protein Neighboring gene Succinyl-coenzyme A synthetase alpha subunit 2 Neighboring gene Dystrophin Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Splicing repression is a major function of TDP-43 in motor neurons. Donde A, et al. Acta Neuropathol, 2019 Nov. PMID 31332509, Free PMC Article
    2. Identification of the Telomere elongation Mutation in Drosophila. Reddy HM, et al. Cells, 2022 Nov 3. PMID 36359878, Free PMC Article
    3. Genome-wide genetic screen identified the link between dG9a and epidermal growth factor receptor signaling pathway in vivo. Shimaji K, et al. Exp Cell Res, 2016 Aug 1. PMID 27343629
    4. Natural genetic variation in Drosophila melanogaster reveals genes associated with Coxiella burnetii infection. Guzman RM, et al. Genetics, 2021 Mar 31. PMID 33789347, Free PMC Article
    5. GWAS for Lifespan and Decline in Climbing Ability in Flies upon Dietary Restriction Reveal decima as a Mediator of Insulin-like Peptide Production. Wilson KA, et al. Curr Biol, 2020 Jul 20. PMID 32502405, Free PMC Article

    See all (32) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    mobile_element

    • Loc: 19440345-19440388 mobile_element_type = transposon:INE-1{}5705
    • Loc: 19441561-19450658 mobile_element_type = transposon:roo{}1388

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG31221-PA
    CG31221-PB
    CG31221-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      19412689..19460311
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_169860.3 → NP_732424.1  uncharacterized protein Dmel_CG31221, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_732424.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7JRL9
      Related
      FBpp0083176
      Conserved Domains (1) summary
      smart00192
      Location:64 → 97
      LDLa; Low-density lipoprotein receptor domain class A

    2. NM_001275800.2 → NP_001262729.1  uncharacterized protein Dmel_CG31221, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262729.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KGY8
      Conserved Domains (1) summary
      smart00192
      Location:64 → 97
      LDLa; Low-density lipoprotein receptor domain class A

    3. NM_169861.3 → NP_732425.1  uncharacterized protein Dmel_CG31221, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_732425.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7JRL9
      Related
      FBpp0083177
      Conserved Domains (1) summary
      smart00192
      Location:64 → 97
      LDLa; Low-density lipoprotein receptor domain class A
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4KGY8 A0A0B4KGY8
    Q7JRL9 Q7JRL9

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