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    CG9988 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43388, updated on 28-Oct-2024

    Summary

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    Official Symbol
    CG9988provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039591
    Locus tag
    Dmel_CG9988
    See related
    AllianceGenome:FB:FBgn0039591
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG9988; gi23172514
    Orthologs
    all
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    Genomic context

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    See CG9988 in Genome Data Viewer
    Location:
    98D7-98D7; 3-96 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (28636411..28638799)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (24462133..24464521)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Heterogeneous nuclear ribonucleoprotein at 98DE Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new domain family in the superfamily of alkaline phosphatases. Bhadra R, et al. In Silico Biol, 2005. PMID 16268782
    2. Gepoclu: a software tool for identifying and analyzing gene positional clusters in large-scale gene expression analysis. Dottorini T, et al. BMC Bioinformatics, 2011 Jan 26. PMID 21269436, Free PMC Article
    3. Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome. MacMillan HA, et al. Sci Rep, 2016 Jun 30. PMID 27357258, Free PMC Article
    4. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
    5. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG9988-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      28636411..28638799
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143368.3 → NP_651625.1  uncharacterized protein Dmel_CG9988 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651625.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6NR35, Q9VAU4
      Related
      FBpp0084674
      Conserved Domains (2) summary
      pfam02995
      Location:90 → 580
      DUF229; Protein of unknown function (DUF229)
      cd16021
      Location:212 → 493
      ALP_like; uncharacterized Alkaline phosphatase subfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6NR35 Q6NR35
    Q9VAU4 Q9VAU4

    Gene LinkOut

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