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    CG32772 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31420, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG32772provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0052772
    Locus tag
    Dmel_CG32772
    See related
    AllianceGenome:FB:FBgn0052772
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG15469; CG6911; Dmel\CG32772
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG32772 in Genome Data Viewer
    Location:
    4D5-4D5; 1-9 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (4909102..4915161)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (4803135..4809194)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene boilerman Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Heparan-alpha-glucosaminide N-acetyltransferase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Separation of transcriptional repressor and activator functions in Drosophila HDAC3. Tang M, et al. Development, 2023 Aug 1. PMID 37455638, Free PMC Article
    2. Mechanisms of HP1-mediated gene silencing in Drosophila. Danzer JR, et al. Development, 2004 Aug. PMID 15215206
    3. Rapid and efficient cDNA library screening by self-ligation of inverse PCR products (SLIP). Hoskins RA, et al. Nucleic Acids Res, 2005 Dec 2. PMID 16326860, Free PMC Article
    4. Generation of a versatile BiFC ORFeome library for analyzing protein-protein interactions in live Drosophila. Bischof J, et al. Elife, 2018 Sep 24. PMID 30247122, Free PMC Article
    5. A Comprehensive Drosophila melanogaster Transcription Factor Interactome. Shokri L, et al. Cell Rep, 2019 Apr 16. PMID 30995488, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG32772-PC
    CG32772-PD
    CG32772-PE
    CG32772-PF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      4909102..4915161
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001297941.1 → NP_001284870.1  uncharacterized protein Dmel_CG32772, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001284870.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V6Z6, Q9W4F9
      Conserved Domains (3) summary
      COG5048
      Location:124 → 378
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:161 → 181
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:173 → 198
      zf-H2C2_2; Zinc-finger double domain

    2. NM_131968.5 → NP_572196.3  uncharacterized protein Dmel_CG32772, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572196.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V6Z6, Q9W4F9
      Conserved Domains (3) summary
      COG5048
      Location:124 → 378
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:161 → 181
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:173 → 198
      zf-H2C2_2; Zinc-finger double domain

    3. NM_001297942.1 → NP_001284871.1  uncharacterized protein Dmel_CG32772, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001284871.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      X2JIB5
      Conserved Domains (2) summary
      sd00017
      Location:15 → 35
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd20908
      Location:76 → 121
      SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins

    4. NM_001103409.2 → NP_001096879.2  uncharacterized protein Dmel_CG32772, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001096879.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      X2JIB5
      Conserved Domains (2) summary
      sd00017
      Location:15 → 35
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cd20908
      Location:76 → 121
      SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SZX9 Q8SZX9
    Q9W4F9 Q9W4F9
    X2JIB5 X2JIB5

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