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    OstDelta Oligosaccharide transferase Delta subunit [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37029, updated on 9-Dec-2024

    Summary

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    Official Symbol
    OstDeltaprovided by FlyBase
    Official Full Name
    Oligosaccharide transferase Delta subunitprovided by FlyBase
    Primary source
    FLYBASE:FBgn0034277
    Locus tag
    Dmel_CG6370
    See related
    AllianceGenome:FB:FBgn0034277
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG6370; Dmel\CG6370; OST
    Summary
    Involved in encapsulation of foreign target. Located in endomembrane system. Is expressed in adult head; adult heart; and organism. Orthologous to human RPN2 (ribophorin II). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See OstDelta in Genome Data Viewer
    Location:
    54E8-54E8; 2-84 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (17764574..17767070, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (13652079..13654575, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene HLH54F Neighboring gene acyl-CoA oxidase 1 Neighboring gene antisense RNA:CR44416 Neighboring gene mir-3643 stem loop Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in encapsulation of foreign target IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in protein N-linked glycosylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in protein N-linked glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in endomembrane system HDA PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of oligosaccharyltransferase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of oligosaccharyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    oligosaccharide transferase delta subunit
    Names
    CG6370-PA
    CG6370-PB
    OstDelta-PA
    OstDelta-PB
    oligosaccharide transferase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      17764574..17767070 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299620.1 → NP_001286549.1  oligosaccharide transferase delta subunit, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286549.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4LFR4
      Conserved Domains (1) summary
      pfam05817
      Location:8 → 622
      Ribophorin_II; Oligosaccharyltransferase subunit Ribophorin II

    2. NM_137421.3 → NP_611265.1  oligosaccharide transferase delta subunit, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611265.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7K110
      Related
      FBpp0088527
      Conserved Domains (1) summary
      pfam05817
      Location:8 → 623
      Ribophorin_II; Oligosaccharyltransferase subunit Ribophorin II
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4LFR4 A0A0B4LFR4
    Q7K110 Q7K110

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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