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    sumf1.L sulfatase modifying factor 1 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 432261, updated on 4-Jan-2025

    Summary

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    Official Symbol
    sumf1.L
    Official Full Name
    sulfatase modifying factor 1 L homeolog
    Primary source
    Xenbase:XB-GENE-866412
    Locus tag
    XELAEV_18023908mg
    See related
    EnsemblRapid:ENSXLAG00005034629 AllianceGenome:Xenbase:XB-GENE-866412
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    sumf1
    Summary
    Human ortholog(s) of this gene implicated in mucosulfatidosis. Orthologous to human SUMF1 (sulfatase modifying factor 1). [provided by Alliance of Genome Resources, Jan 2025]
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    Genomic context

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    See sumf1.L in Genome Data Viewer
    Location:
    chromosome: 4L
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (129181573..129208562, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4L NC_030730.1 (123946764..123973774, complement)

    Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat neuronal 1 L homeolog Neighboring gene SET domain and mariner transposase fusion gene L homeolog Neighboring gene inositol 1,4,5-trisphosphate receptor type 1 L homeolog Neighboring gene basic helix-loop-helix family member e40 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    formylglycine-generating enzyme

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      129181573..129208562 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018259008.2 → XP_018114497.1  formylglycine-generating enzyme

      UniProtKB/TrEMBL
      A0A1L8GPM5, A0A974D7G5, Q05AY6
      Related
      ENSXLAP00005103608.1, ENSXLAT00005105613.1

    RNA

    1. XR_001935389.2 RNA Sequence

      Related
      ENSXLAT00005105670.1
    Nucleotide Protein Strain
    Heading Accession and Version

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