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    putative flavin adenine dinucleotide transporter [ Saccharomyces cerevisiae S288C ]

    Gene ID: 854548, updated on 9-Dec-2024

    Summary

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    Official Full Name
    putative flavin adenine dinucleotide transporter
    Primary source
    SGD:S000005892
    Locus tag
    YOR365C
    See related
    AllianceGenome:SGD:S000005892; FungiDB:YOR365C; VEuPathDB:YOR365C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Involved in sphingolipid biosynthetic process. Predicted to be active in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    Location:
    chromosome: XV
    Exon count:
    1
    Sequence:
    Chromosome: XV; NC_001147.6 (1023461..1025572, complement)

    Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene proteasome core particle subunit alpha 7 Neighboring gene oleate-activated transcription factor PIP2 Neighboring gene Scp1p Neighboring gene Rad17p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001147.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Chemogenetic E-MAP in Saccharomyces cerevisiae for Identification of Membrane Transporters Operating Lipid Flip Flop. Vazquez HM, et al. PLoS Genet, 2016 Jul. PMID 27462707, Free PMC Article
    2. The nucleotide sequence of Saccharomyces cerevisiae chromosome XV. Dujon B, et al. Nature, 1997 May 29. PMID 9169874
    3. Interrogation of γ-tubulin alleles using high-resolution fitness measurements reveals a distinct cytoplasmic function in spindle alignment. Shulist K, et al. Sci Rep, 2017 Sep 12. PMID 28900268, Free PMC Article
    4. The complete spectrum of yeast chromosome instability genes identifies candidate CIN cancer genes and functional roles for ASTRA complex components. Stirling PC, et al. PLoS Genet, 2011 Apr. PMID 21552543, Free PMC Article
    5. A systematic proximity ligation approach to studying protein-substrate specificity identifies the substrate spectrum of the Ssh1 translocon. Cohen N, et al. EMBO J, 2023 Jun 1. PMID 37073826, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in fungal-type cell wall biogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in sphingolipid biosynthetic process IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative flavin adenine dinucleotide transporter
    NP_015010.1
    • Putative protein involved in sphingolipid biosynthesis; not an essential gene; YOR365C has a paralog, FLC2, that arose from the whole genome duplication

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001147.6 Reference assembly

      Range
      1023461..1025572 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001183785.1 → NP_015010.1  TPA: putative flavin adenine dinucleotide transporter [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_015010.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W359, Q08844
      UniProtKB/TrEMBL
      B3LK21, B5VSP1, C8ZHB3, N1NX28
      Conserved Domains (2) summary
      pfam06011
      Location:204 → 652
      TRP; Transient receptor potential (TRP) ion channel
      pfam14558
      Location:60 → 199
      TRP_N; ML-like domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q08844.1

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