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    si:ch211-217k17.11 si:ch211-217k17.11 [ Danio rerio (zebrafish) ]

    Gene ID: 798849, updated on 12-Sep-2024

    Summary

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    Official Symbol
    si:ch211-217k17.11provided by ZNC
    Official Full Name
    si:ch211-217k17.11provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-8636
    See related
    Ensembl:ENSDARG00000093748 AllianceGenome:ZFIN:ZDB-GENE-030131-8636
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fa92h01; wu:fa92h01
    Orthologs
    all
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    Genomic context

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    See si:ch211-217k17.11 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (52440965..52443359, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (51805836..51808618, complement)

    Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene si:ch211-217k17.12 Neighboring gene zgc:194101 Neighboring gene si:ch211-217k17.10 Neighboring gene coiled-coil domain containing 86

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    uncharacterized protein si:ch211-217k17.11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007112.7 Reference GRCz11 Primary Assembly

      Range
      52440965..52443359 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001339238.8 → XP_001339274.1  uncharacterized protein si:ch211-217k17.11

      UniProtKB/TrEMBL
      A0A8M1PZB2, H0WEZ4
      Related
      ENSDARP00000125424.1, ENSDART00000144676.2
      Conserved Domains (2) summary
      smart00213
      Location:64 → 131
      UBQ; Ubiquitin homologues
      cl00155
      Location:73 → 132
      UBQ; Ubiquitin-like proteins
    Nucleotide Protein
    Heading Accession and Version

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